RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SEMA6CQ9H3T2 930 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 PCDHA4Q9UN74 947 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 CSADQ9Y600 493 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 HCLS1P14317 486 aaPredicted RBP7.19□□□□□ -1.26
PMS1-203ENST00000409593 TTLL4Q14679 1199 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 EZH1Q92800 747 aaPredicted RBP7.19□□□□□ -1.26
PMS1-203ENST00000409593 TBC1D32Q96NH3 1257 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 GSX1Q9H4S2 264 aaPredicted RBP7.19□□□□□ -1.26
PMS1-203ENST00000409593 PICK1Q9NRD5 415 aa7.19□□□□□ -1.26
PMS1-203ENST00000409593 BTBD11A6QL63 1104 aa7.18□□□□□ -1.26
PMS1-203ENST00000409593 DCDC2CA8MYV0 355 aa7.18□□□□□ -1.26
PMS1-203ENST00000409593 RNGTTO60942 597 aaKnown RBP7.18□□□□□ -1.26
PMS1-203ENST00000409593 SHKBP1Q8TBC3 707 aa7.18□□□□□ -1.26
PMS1-203ENST00000409593 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
PMS1-203ENST00000409593 WDR64B1ANS9 1081 aa7.17□□□□□ -1.26
PMS1-203ENST00000409593 LIG3P49916 1009 aa7.17□□□□□ -1.26
PMS1-203ENST00000409593 ST13P50502 369 aaKnown RBP7.17□□□□□ -1.26
PMS1-203ENST00000409593 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
PMS1-203ENST00000409593 SLC51AQ86UW1 340 aa7.17□□□□□ -1.26
PMS1-203ENST00000409593 ELMO3Q96BJ8 720 aa7.17□□□□□ -1.26
PMS1-203ENST00000409593 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 TGFB1P01137 390 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 ZDHHC13Q8IUH4 622 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
PMS1-203ENST00000409593 GIMAP7Q8NHV1 300 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 SSU72Q9NP77 194 aaKnown RBP7.16□□□□□ -1.26
PMS1-203ENST00000409593 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 PRKAG2Q9UGJ0 569 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 USP31Q70CQ4 1352 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 F6X3S4 739 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 DYNC1LI2O43237 492 aaPredicted RBP7.16□□□□□ -1.26
PMS1-203ENST00000409593 ZNF16P17020 682 aaPredicted RBP7.16□□□□□ -1.26
PMS1-203ENST00000409593 ERVK-24P63145 666 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 SEPT6Q14141 434 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 PPM1JQ5JR12 505 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 C12orf40Q86WS4 652 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 NOC4LQ9BVI4 516 aaKnown RBP7.16□□□□□ -1.26
PMS1-203ENST00000409593 ATG3Q9NT62 314 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 RNF112Q9ULX5 631 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 PCDHB5Q9Y5E4 795 aa7.16□□□□□ -1.26
PMS1-203ENST00000409593 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.27
PMS1-203ENST00000409593 F13BP05160 661 aa7.15□□□□□ -1.27
PMS1-203ENST00000409593 RPS26P62854 115 aaKnown RBP7.15□□□□□ -1.27
PMS1-203ENST00000409593 PTPN11Q06124 597 aaPredicted RBP7.15□□□□□ -1.27
PMS1-203ENST00000409593 OSBPL1AQ9BXW6 950 aa7.15□□□□□ -1.27
PMS1-203ENST00000409593 NEFMP07197 916 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 RLBP1P12271 317 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 ADMP35318 185 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 SCARA3Q6AZY7 606 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
PMS1-203ENST00000409593 AGMOQ6ZNB7 445 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 ZAR1Q86SH2 424 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 SHISA5Q8N114 240 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 RNF214Q8ND24 703 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 ISL2Q96A47 359 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 MIR1-1HGQ9H1L0 117 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 TLR6Q9Y2C9 796 aa7.14□□□□□ -1.27
PMS1-203ENST00000409593 CDK5R2Q13319 367 aa7.13□□□□□ -1.27
PMS1-203ENST00000409593 INPP5AQ14642 412 aa7.13□□□□□ -1.27
PMS1-203ENST00000409593 WIPI1Q5MNZ9 446 aaPredicted RBP7.13□□□□□ -1.27
PMS1-203ENST00000409593 LRFN4Q6PJG9 635 aa7.13□□□□□ -1.27
PMS1-203ENST00000409593 PLPPR2Q96GM1 343 aa7.13□□□□□ -1.27
PMS1-203ENST00000409593 FAM170BA6NMN3 283 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 TFE3P19532 575 aaPredicted RBP7.12□□□□□ -1.27
PMS1-203ENST00000409593 SSTR4P31391 388 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 MRPL58Q14197 206 aaKnown RBP7.12□□□□□ -1.27
PMS1-203ENST00000409593 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.12□□□□□ -1.27
PMS1-203ENST00000409593 CDK8P49336 464 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 LRP8Q14114 963 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 SEZ6L2Q6UXD5 910 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 HDXQ7Z353 690 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 METTL22Q9BUU2 404 aaPredicted RBP7.12□□□□□ -1.27
PMS1-203ENST00000409593 C1GALT1Q9NS00 363 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 PCOLCE2Q9UKZ9 415 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 LEMD3Q9Y2U8 911 aa7.12□□□□□ -1.27
PMS1-203ENST00000409593 PRR19A6NJB7 356 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 GBP2P32456 591 aaPredicted RBP7.11□□□□□ -1.27
PMS1-203ENST00000409593 GRIK1P39086 918 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 ZBTB37Q5TC79 503 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 PHC3Q8NDX5 983 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 JARID2Q92833 1246 aaPredicted RBP7.11□□□□□ -1.27
PMS1-203ENST00000409593 GATA6Q92908 595 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 PIM2Q9P1W9 311 aa7.11□□□□□ -1.27
PMS1-203ENST00000409593 COBLO75128 1261 aa7.1□□□□□ -1.27
PMS1-203ENST00000409593 CDC37L1Q7L3B6 337 aa7.1□□□□□ -1.27
PMS1-203ENST00000409593 RELL1Q8IUW5 271 aa7.1□□□□□ -1.27
PMS1-203ENST00000409593 PCMTD2Q9NV79 361 aa7.1□□□□□ -1.27
PMS1-203ENST00000409593 FANCGO15287 622 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 FAM87AP0C7U9 286 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 ETF1P62495 437 aaKnown RBP7.09□□□□□ -1.27
PMS1-203ENST00000409593 CYP27A1Q02318 531 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 DUSP27Q5VZP5 1158 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 DIEXFQ68CQ4 756 aaKnown RBP7.09□□□□□ -1.27
PMS1-203ENST00000409593 UBE3DQ7Z6J8 389 aa7.09□□□□□ -1.27
PMS1-203ENST00000409593 ZFP64Q9NPA5 681 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms