RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 GOLGA6BA6NDN3 693 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 GNGT1P63211 74 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ANKRD24Q8TF21 1146 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 PAGR1Q9BTK6 254 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 OPA1O60313 960 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ZNF18P17022 549 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 CDR1P51861 262 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 SARNPP82979 210 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 GUCY1B3Q02153 619 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 IQCA1Q86XH1 822 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 NOA1Q8NC60 698 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ENOX1Q8TC92 643 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 FAXDC2Q96IV6 333 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 HPSEQ9Y251 543 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ZC3H4Q9UPT8 1303 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 GRIN2DO15399 1336 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 FAM237AA0A1B0GTK4 181 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ZEB2O60315 1214 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 PPP6R2O75170 966 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 NEBLO76041 1014 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 SMTNP53814 917 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 CKAP4Q07065 602 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 DRP2Q13474 957 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 NR1I3Q14994 352 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ZKSCAN8Q15776 578 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 NBPF14Q5TI25 921 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 CNGA4Q8IV77 575 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 ANKRD18AQ8IVF6 992 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 RUBCNQ92622 972 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 C8orf76Q96K31 380 aa6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 TRIM6Q9C030 488 aaPredicted RBP6.62□□□□□ -1.35
R3HDM1-202ENST00000409478 TSPOAP1O95153 1857 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 WASLO00401 505 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 NDUFAB1O14561 156 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CYP21A2P08686 494 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 SKOR1P84550 965 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 G3BP1Q13283 466 aaKnown RBP eCLIP6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 MTF1Q14872 753 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 SLC39A14Q15043 492 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 IQCEQ6IPM2 695 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CCDC70Q6NSX1 233 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 RAD9BQ6WBX8 426 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 MLKLQ8NB16 471 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 MAGEC3Q8TD91 643 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 SGSM3Q96HU1 749 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 KLC4Q9NSK0 619 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 MYO1FO00160 1098 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 FOXO3O43524 673 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 AMPD2Q01433 879 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 PNOCQ13519 176 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CCDC102BQ68D86 513 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 SH3GL2Q99962 352 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 BOLA2Q9H3K6 86 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 GGA2Q9UJY4 613 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 NFE2L3Q9Y4A8 694 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 KDRP35968 1356 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 MROH7-TTC4A0A0A0MT08 1334 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 A0A1B0GTH6 734 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CEP85LQ5SZL2 805 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 TMTC1Q8IUR5 882 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CTAGE1Q96RT6 745 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 SELENOOQ9BVL4 669 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 PHAXQ9H814 394 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 VCPKMTQ9H867 229 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 CD248Q9HCU0 757 aa6.61□□□□□ -1.35
R3HDM1-202ENST00000409478 TMEM131LA2VDJ0 1609 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MAP3K19Q56UN5 1328 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MAP3K15Q6ZN16 1313 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 GOLGA6L7A0A1B0GV03 622 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 AGPSO00116 658 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 POLR3DP05423 398 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 EPB41P11171 864 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 EZRP15311 586 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 FECHP22830 423 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 PDIA3P30101 505 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 HDGFP51858 240 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 EXOSC10Q01780 885 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 TAF7Q15545 349 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 PTPN21Q16825 1174 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 RNF217Q8TC41 542 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 SEC62Q99442 399 aaKnown RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 LRRC2Q9BYS8 371 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MLH3Q9UHC1 1453 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 AKAP12Q02952 1782 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 KLHL33A6NCF5 533 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 GNAT3A8MTJ3 354 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MFAP3LO75121 409 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MCMDC2Q4G0Z9 681 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 FBXL16Q8N461 479 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 TRIML1Q8N9V2 468 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 EAF2Q96CJ1 260 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 FAM184BQ9ULE4 1060 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 MED1Q15648 1581 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 HOXB7P09629 217 aa6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 ACTN3Q08043 901 aaPredicted RBP6.6□□□□□ -1.35
R3HDM1-202ENST00000409478 CCDC40Q4G0X9 1142 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms