RNA–Protein interactions for RNA: ENST00000409244.5

TMEM139-203, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 1,257 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-203ENST00000409244 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 GDF15Q99988 308 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 TBC1D2Q9BYX2 928 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 NBPF3Q9H094 633 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.11□□□□□ -0.31
TMEM139-203ENST00000409244 GABRQQ9UN88 632 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 LRRFIP2Q9Y608 721 aaKnown RBP13.11□□□□□ -0.31
TMEM139-203ENST00000409244 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
TMEM139-203ENST00000409244 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 SEMA3EO15041 775 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 ELNP15502 786 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 PTPRAP18433 802 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 EXOSC9Q06265 439 aaKnown RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
TMEM139-203ENST00000409244 USP40Q9NVE5 1235 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 AGTPBP1Q9UPW5 1226 aa13.1□□□□□ -0.31
TMEM139-203ENST00000409244 CTNND1O60716 968 aaKnown RBP13.09□□□□□ -0.31
TMEM139-203ENST00000409244 C7orf61Q8IZ16 206 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 TDHQ8IZJ6 230 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 AFG3L2Q9Y4W6 797 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
TMEM139-203ENST00000409244 FGFR2P21802 821 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 NFIAQ12857 509 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
TMEM139-203ENST00000409244 PROCA1Q8NCQ7 364 aaPredicted RBP13.08□□□□□ -0.32
TMEM139-203ENST00000409244 C11orf49Q9H6J7 331 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 HMX1Q9NP08 348 aaPredicted RBP13.08□□□□□ -0.32
TMEM139-203ENST00000409244 SPINK5Q9NQ38 1064 aaPredicted RBP13.08□□□□□ -0.32
TMEM139-203ENST00000409244 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 RPTORQ8N122 1335 aa13.08□□□□□ -0.32
TMEM139-203ENST00000409244 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 ZSWIM8A7E2V4 1837 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 PHF20L1A8MW92 1017 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 ZBTB22O15209 634 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
TMEM139-203ENST00000409244 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
TMEM139-203ENST00000409244 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 MRS2Q9HD23 443 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 ATRNL1Q5VV63 1379 aa13.07□□□□□ -0.32
TMEM139-203ENST00000409244 TRIM75PA6NK02 468 aa13.06□□□□□ -0.32
TMEM139-203ENST00000409244 EYA2O00167 538 aa13.06□□□□□ -0.32
TMEM139-203ENST00000409244 MAP3K10Q02779 954 aa13.06□□□□□ -0.32
TMEM139-203ENST00000409244 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
TMEM139-203ENST00000409244 ANKRD13CQ8N6S4 541 aa13.06□□□□□ -0.32
TMEM139-203ENST00000409244 UBE2OQ9C0C9 1292 aaKnown RBP13.06□□□□□ -0.32
TMEM139-203ENST00000409244 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
TMEM139-203ENST00000409244 MAP4K4O95819 1239 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-203ENST00000409244 PRDX5P30044 214 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 RGS3P49796 1198 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 SPTY2D1Q68D10 685 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-203ENST00000409244 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
TMEM139-203ENST00000409244 ANKRD44Q8N8A2 993 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 SOCS4Q8WXH5 440 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 HDAC5Q9UQL6 1122 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 PTPRCP08575 1304 aa13.05□□□□□ -0.32
TMEM139-203ENST00000409244 TBC1D12O60347 775 aa13.04□□□□□ -0.32
TMEM139-203ENST00000409244 MAGEA10P43363 369 aaPredicted RBP13.04□□□□□ -0.32
TMEM139-203ENST00000409244 FAM109BQ6ICB4 259 aaPredicted RBP13.04□□□□□ -0.32
TMEM139-203ENST00000409244 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
TMEM139-203ENST00000409244 OSBPL5Q9H0X9 879 aaPredicted RBP13.04□□□□□ -0.32
TMEM139-203ENST00000409244 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
TMEM139-203ENST00000409244 OGDHLQ9ULD0 1010 aa13.04□□□□□ -0.32
TMEM139-203ENST00000409244 GAKO14976 1311 aa13.04□□□□□ -0.32
TMEM139-203ENST00000409244 PDS5AQ29RF7 1337 aaKnown RBP13.04□□□□□ -0.32
TMEM139-203ENST00000409244 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
TMEM139-203ENST00000409244 CIAO1O76071 339 aa13.03□□□□□ -0.32
TMEM139-203ENST00000409244 PDE3AQ14432 1141 aa13.03□□□□□ -0.32
TMEM139-203ENST00000409244 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
TMEM139-203ENST00000409244 GTF3C2Q8WUA4 911 aaPredicted RBP13.03□□□□□ -0.32
TMEM139-203ENST00000409244 CEP126Q9P2H0 1117 aa13.03□□□□□ -0.32
TMEM139-203ENST00000409244 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
TMEM139-203ENST00000409244 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMEM139-203ENST00000409244 ZNF280CQ8ND82 737 aa13.02□□□□□ -0.33
TMEM139-203ENST00000409244 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.33
TMEM139-203ENST00000409244 RFX7Q2KHR2 1363 aa13.02□□□□□ -0.33
TMEM139-203ENST00000409244 IRX3P78415 501 aaPredicted RBP13.01□□□□□ -0.33
TMEM139-203ENST00000409244 Q7L0L9 218 aa13.01□□□□□ -0.33
TMEM139-203ENST00000409244 CCAR1Q8IX12 1150 aaKnown RBP13.01□□□□□ -0.33
TMEM139-203ENST00000409244 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
TMEM139-203ENST00000409244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM139-203ENST00000409244 MORF4L1Q9UBU8 362 aa13.01□□□□□ -0.33
TMEM139-203ENST00000409244 COL2A1P02458 1487 aaPredicted RBP13□□□□□ -0.33
TMEM139-203ENST00000409244 USP17L5A8MUK1 530 aa13□□□□□ -0.33
TMEM139-203ENST00000409244 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
TMEM139-203ENST00000409244 SYN1P17600 705 aa13□□□□□ -0.33
TMEM139-203ENST00000409244 IL15P40933 162 aaPredicted RBP13□□□□□ -0.33
TMEM139-203ENST00000409244 BTDP43251 543 aa13□□□□□ -0.33
TMEM139-203ENST00000409244 GSTO1P78417 241 aa13□□□□□ -0.33
TMEM139-203ENST00000409244 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms