RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 CDC42EP5Q6NZY7 148 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 C9orf78Q9NZ63 289 aaPredicted RBP16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 DAGLAQ9Y4D2 1042 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 VAMP4O75379 141 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 METTL24Q5JXM2 366 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 SLC45A1Q9Y2W3 748 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 ZHX2Q9Y6X8 837 aa16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
CHRNA1-203ENST00000409219 PDE8BO95263 885 aa16.21■□□□□ 0.19
CHRNA1-203ENST00000409219 DIXDC1Q155Q3 683 aa16.21■□□□□ 0.19
CHRNA1-203ENST00000409219 SCYL3Q8IZE3 742 aa16.21■□□□□ 0.19
CHRNA1-203ENST00000409219 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
CHRNA1-203ENST00000409219 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
CHRNA1-203ENST00000409219 PTPRAP18433 802 aa16.2■□□□□ 0.18
CHRNA1-203ENST00000409219 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHRNA1-203ENST00000409219 AFG3L2Q9Y4W6 797 aa16.2■□□□□ 0.18
CHRNA1-203ENST00000409219 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 COA7Q96BR5 231 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 LOC285556D6RIA3 1793 aa16.19■□□□□ 0.18
CHRNA1-203ENST00000409219 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 HMGCRP04035 888 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 PRDX5P30044 214 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 RABL6Q3YEC7 729 aaPredicted RBP16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 CDH23Q9H251 3354 aa16.18■□□□□ 0.18
CHRNA1-203ENST00000409219 FGFR2P21802 821 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 TRIM32Q13049 653 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 FAM110CQ1W6H9 321 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 WDR66Q8TBY9 1149 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 UBE2OQ9C0C9 1292 aaKnown RBP16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 C11orf49Q9H6J7 331 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 UTYO14607 1347 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 PFASO15067 1338 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 COL2A1P02458 1487 aaPredicted RBP16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 RFX7Q2KHR2 1363 aa16.17■□□□□ 0.18
CHRNA1-203ENST00000409219 IFIT1P09914 478 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 PUM3Q15397 648 aaKnown RBP16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 AGTPBP1Q9UPW5 1226 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 MYH2Q9UKX2 1941 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 SLURP2P0DP57 97 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 CCDC84Q86UT8 332 aaPredicted RBP16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 GUCD1Q96NT3 240 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 USP40Q9NVE5 1235 aa16.16■□□□□ 0.18
CHRNA1-203ENST00000409219 PRUNE2Q8WUY3 3088 aa16.15■□□□□ 0.18
CHRNA1-203ENST00000409219 RGS3P49796 1198 aa16.15■□□□□ 0.18
CHRNA1-203ENST00000409219 SH3BP5LQ7L8J4 393 aa16.15■□□□□ 0.18
CHRNA1-203ENST00000409219 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
CHRNA1-203ENST00000409219 MAP3K10Q02779 954 aa16.14■□□□□ 0.17
CHRNA1-203ENST00000409219 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
CHRNA1-203ENST00000409219 MUC3AQ02505 3323 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 ATAD5Q96QE3 1844 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 ENTPD3O75355 529 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 TRIB2Q92519 343 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 IDI2Q9BXS1 227 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 PNMA3Q9UL41 463 aa16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
CHRNA1-203ENST00000409219 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 LDHBP07195 334 aaKnown RBP16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 SLC5A1P13866 664 aa16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CHRNA1-203ENST00000409219 CCDC184Q52MB2 194 aa16.11■□□□□ 0.17
CHRNA1-203ENST00000409219 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
CHRNA1-203ENST00000409219 LPIN2Q92539 896 aa16.11■□□□□ 0.17
CHRNA1-203ENST00000409219 DNAH12Q6ZR08 3092 aa16.11■□□□□ 0.17
CHRNA1-203ENST00000409219 COL6A1P12109 1028 aa16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 GCLCP48506 637 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 FAM109BQ6ICB4 259 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 ZSCAN29Q8IWY8 852 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 FAM161BQ96MY7 647 aa16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 DDX4Q9NQI0 724 aaKnown RBP16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 GAKO14976 1311 aa16.1■□□□□ 0.17
CHRNA1-203ENST00000409219 SALL1Q9NSC2 1324 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms