RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 ROBO3Q96MS0 1386 aa13.27□□□□□ -0.29
RAB1C-201ENST00000409159 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.29
RAB1C-201ENST00000409159 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
RAB1C-201ENST00000409159 LMNB1P20700 586 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
RAB1C-201ENST00000409159 HAND2P61296 217 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 CXCL9Q07325 125 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 PDE4BQ07343 736 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 FKBP1CQ5VVH2 108 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 TBC1D10CQ8IV04 446 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 KIAA0825Q8IV33 1275 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
RAB1C-201ENST00000409159 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
RAB1C-201ENST00000409159 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 SOCS7O14512 581 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 ZNF280AP59817 542 aaPredicted RBP13.25□□□□□ -0.29
RAB1C-201ENST00000409159 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
RAB1C-201ENST00000409159 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 CDC42EP5Q6NZY7 148 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 TGFBRAP1Q8WUH2 860 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 ESR2Q92731 530 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 ZNF274Q96GC6 653 aaPredicted RBP13.25□□□□□ -0.29
RAB1C-201ENST00000409159 DHX36Q9H2U1 1008 aaKnown RBP13.25□□□□□ -0.29
RAB1C-201ENST00000409159 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
RAB1C-201ENST00000409159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAB1C-201ENST00000409159 FLT1P17948 1338 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 F8W031 263 aaPredicted RBP13.24□□□□□ -0.29
RAB1C-201ENST00000409159 PRC1O43663 620 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 ENTPD3O75355 529 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 WDHD1O75717 1129 aaPredicted RBP13.24□□□□□ -0.29
RAB1C-201ENST00000409159 RAD17O75943 681 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
RAB1C-201ENST00000409159 LIFRP42702 1097 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 RCAN1P53805 252 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
RAB1C-201ENST00000409159 MXD3Q9BW11 206 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 FER1L6Q2WGJ9 1857 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 TIAM2Q8IVF5 1701 aa13.24□□□□□ -0.29
RAB1C-201ENST00000409159 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
RAB1C-201ENST00000409159 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
RAB1C-201ENST00000409159 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 SCNN1DP51172 638 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 FGD1P98174 961 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 DLGAP5Q15398 846 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 CFAP100Q494V2 611 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 Q6ZUG5 572 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ARHGAP27Q6ZUM4 889 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
RAB1C-201ENST00000409159 EHD4Q9H223 541 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.23□□□□□ -0.29
RAB1C-201ENST00000409159 COL4A5P29400 1685 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
RAB1C-201ENST00000409159 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
RAB1C-201ENST00000409159 CPA1P15085 419 aa13.22□□□□□ -0.29
RAB1C-201ENST00000409159 CTDSPL2Q05D32 466 aa13.22□□□□□ -0.29
RAB1C-201ENST00000409159 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
RAB1C-201ENST00000409159 OSBPL5Q9H0X9 879 aaPredicted RBP13.22□□□□□ -0.29
RAB1C-201ENST00000409159 ZSWIM5Q9P217 1185 aa13.22□□□□□ -0.29
RAB1C-201ENST00000409159 SWAP70Q9UH65 585 aa13.22□□□□□ -0.29
RAB1C-201ENST00000409159 MYO5AQ9Y4I1 1855 aaKnown RBP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 NEDD4P46934 1319 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 ERICH2A1L162 156 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 B4E1Z4 1266 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 SH2B2O14492 632 aaPredicted RBP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 MYO1BO43795 1136 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 DHX16O60231 1041 aaKnown RBP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 GRIN3BO60391 1043 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 HLA-DOAP06340 250 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 DDIT3P35638 169 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 ANTXR2P58335 489 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 RASSF7Q02833 373 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 METTL16Q86W50 562 aaKnown RBP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 IQCA1Q86XH1 822 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 MAPKAPK5Q8IW41 473 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.29
RAB1C-201ENST00000409159 TCP11L1Q9NUJ3 509 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
RAB1C-201ENST00000409159 ATRNL1Q5VV63 1379 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 CHD4Q14839 1912 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 PFKFB2O60825 505 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 KDM4AO75164 1064 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 GABPAQ06546 454 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 ME3Q16798 604 aa13.2□□□□□ -0.3
RAB1C-201ENST00000409159 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms