RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 MYO1CO00159 1063 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 TPM1P09493 284 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 WWC2Q6AWC2 1192 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 CCDC12Q8WUD4 166 aaPredicted RBP17.82■□□□□ 0.44
ATG4B-205ENST00000404914 PNKPQ96T60 521 aa17.82■□□□□ 0.44
ATG4B-205ENST00000404914 HSPA1LP34931 641 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 KRT40Q6A162 431 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 GRAMD1CQ8IYS0 662 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 FBXL16Q8N461 479 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 PDE11AQ9HCR9 933 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 SEC31BQ9NQW1 1179 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 SOWAHDA6NJG2 315 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 SCARF1Q14162 830 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 DHX8Q14562 1220 aaKnown RBP17.81■□□□□ 0.44
ATG4B-205ENST00000404914 WASHC4Q2M389 1173 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 RESP18Q5W5W9 173 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 ALG1Q9BT22 464 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 TEX13AQ9BXU3 409 aaPredicted RBP17.81■□□□□ 0.44
ATG4B-205ENST00000404914 ANKZF1Q9H8Y5 726 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 PUS7LQ9H0K6 701 aaKnown RBP17.81■□□□□ 0.44
ATG4B-205ENST00000404914 LZTFL1Q9NQ48 299 aa17.81■□□□□ 0.44
ATG4B-205ENST00000404914 SAMSN1Q9NSI8 373 aaKnown RBP17.81■□□□□ 0.44
ATG4B-205ENST00000404914 ADORA1P30542 326 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 MCM6Q14566 821 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 RSPH14Q9UHP6 348 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 NFE2L3Q9Y4A8 694 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 MAP2K7O14733 419 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 TXLNAP40222 546 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 GOLGA1Q92805 767 aa17.8■□□□□ 0.44
ATG4B-205ENST00000404914 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
ATG4B-205ENST00000404914 COL18A1P39060 1754 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 STX10O60499 249 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 ABL1P00519 1130 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 MDM2Q00987 491 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-205ENST00000404914 MAN1B1Q9UKM7 699 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 ZNF18P17022 549 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 VPS18Q9P253 973 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 KCNH3Q9ULD8 1083 aa17.79■□□□□ 0.44
ATG4B-205ENST00000404914 COL22A1Q8NFW1 1626 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-205ENST00000404914 TEX33O43247 280 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
ATG4B-205ENST00000404914 RAD9BQ6WBX8 426 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 MYL10Q9BUA6 226 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 BEND6Q5SZJ8 279 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-205ENST00000404914 SPECC1LQ69YQ0 1117 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
ATG4B-205ENST00000404914 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
ATG4B-205ENST00000404914 PPP6R2O75170 966 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 GPS2Q13227 327 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 CCDC102BQ68D86 513 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 EXOC4Q96A65 974 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATG4B-205ENST00000404914 CUTAO60888 179 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 CHMP4BP1P59074 171 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 RASSF4Q9H2L5 321 aa17.77■□□□□ 0.44
ATG4B-205ENST00000404914 CCDC151A5D8V7 595 aa17.77■□□□□ 0.43
ATG4B-205ENST00000404914 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-205ENST00000404914 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-205ENST00000404914 SRLQ86TD4 932 aa17.77■□□□□ 0.43
ATG4B-205ENST00000404914 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.43
ATG4B-205ENST00000404914 NCOA7Q8NI08 942 aa17.77■□□□□ 0.43
ATG4B-205ENST00000404914 CPLX3Q8WVH0 158 aa17.77■□□□□ 0.43
ATG4B-205ENST00000404914 INCENPQ9NQS7 918 aa17.77■□□□□ 0.43
ATG4B-205ENST00000404914 RANBP6O60518 1105 aaKnown RBP17.76■□□□□ 0.43
ATG4B-205ENST00000404914 MICU3Q86XE3 530 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 TBC1D10CQ8IV04 446 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 GOLGA5Q8TBA6 731 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 RRP15Q9Y3B9 282 aaKnown RBP17.76■□□□□ 0.43
ATG4B-205ENST00000404914 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 TSPYL1Q9H0U9 437 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 ABCB6Q9NP58 842 aa17.76■□□□□ 0.43
ATG4B-205ENST00000404914 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 RALYLQ86SE5 291 aaKnown RBP17.75■□□□□ 0.43
ATG4B-205ENST00000404914 SERTAD1Q9UHV2 236 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 FAN1Q9Y2M0 1017 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 ANKRD65E5RJM6 399 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 H7C1W4 665 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 EYA2O00167 538 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 ACTN2P35609 894 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 ZAP70P43403 619 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 SLC9C2Q5TAH2 1124 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 CCDC85AQ96PX6 553 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-205ENST00000404914 PRDM11Q9NQV5 511 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 RAI14Q9P0K7 980 aa17.75■□□□□ 0.43
ATG4B-205ENST00000404914 CPDO75976 1380 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms