RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 JCADQ9P266 1359 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 AGLP35573 1532 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 FMN2Q9NZ56 1722 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 IKBKBO14920 756 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 NR5A1Q13285 461 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 TRIM29Q14134 588 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 SPECC1LQ69YQ0 1117 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 RAD9BQ6WBX8 426 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 BRAPQ7Z569 592 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 MPHOSPH8Q99549 860 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 AGXT2Q9BYV1 514 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 MAN1B1Q9UKM7 699 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 MAPK8IP1Q9UQF2 711 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 SLC9C2Q5TAH2 1124 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 BPIFA3Q9BQP9 254 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
SMC1B-202ENST00000404354 TEX13AQ9BXU3 409 aaPredicted RBP10.95□□□□□ -0.66
SMC1B-202ENST00000404354 KCND1Q9NSA2 647 aa10.95□□□□□ -0.66
SMC1B-202ENST00000404354 PIK3C2AO00443 1686 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 MRPS25P82663 173 aaKnown RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 AKAP17AQ02040 695 aaKnown RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 RBL2Q08999 1139 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 SNAP23O00161 211 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 ENC1O14682 589 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 TXLNAP40222 546 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 FOXO4P98177 505 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 LEKR1Q6ZMV7 388 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 NUP133Q8WUM0 1156 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 XAGE2Q96GT9 111 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 MED15Q96RN5 788 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 SLC52A2Q9HAB3 445 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 TUBE1Q9UJT0 475 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 NCAPH2Q6IBW4 605 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 MB21D2Q8IYB1 491 aaPredicted RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 IPO4Q8TEX9 1081 aaKnown RBP10.94□□□□□ -0.66
SMC1B-202ENST00000404354 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
SMC1B-202ENST00000404354 SNRPA1P09661 255 aaKnown RBP10.93□□□□□ -0.66
SMC1B-202ENST00000404354 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 PTPAQ15257 358 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 SLC35F6Q8N357 371 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 IGSF22Q8N9C0 903 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
SMC1B-202ENST00000404354 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 EYA2O00167 538 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 CCDC175P0C221 793 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 CASP14P31944 242 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 VSNL1P62760 191 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 POSTNQ15063 836 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 RSRC2Q7L4I2 434 aaKnown RBP10.93□□□□□ -0.66
SMC1B-202ENST00000404354 PPFIBP1Q86W92 1011 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 JMYQ8N9B5 988 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 RAI14Q9P0K7 980 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 TRIM10Q9UDY6 481 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 CRYBG1Q9Y4K1 1723 aa10.93□□□□□ -0.66
SMC1B-202ENST00000404354 GSPT2Q8IYD1 628 aaKnown RBP10.92□□□□□ -0.66
SMC1B-202ENST00000404354 NOA1Q8NC60 698 aaKnown RBP10.92□□□□□ -0.66
SMC1B-202ENST00000404354 RABGGTAQ92696 567 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 CAPZA3Q96KX2 299 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 ANKZF1Q9H8Y5 726 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 PCDHB6Q9Y5E3 794 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 KIF5CO60282 957 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 RANBP6O60518 1105 aaKnown RBP10.92□□□□□ -0.66
SMC1B-202ENST00000404354 CUTAO60888 179 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 TPM1P09493 284 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 CABP4P57796 275 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMC1B-202ENST00000404354 VPS16Q9H269 839 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 ZBTB43O43298 467 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 STX10O60499 249 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 CCDC57Q2TAC2 916 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 OXER1Q8TDS5 423 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 SLF1Q9BQI6 1058 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 POLD4Q9HCU8 107 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 ANGEL1Q9UNK9 670 aaKnown RBP10.92□□□□□ -0.66
SMC1B-202ENST00000404354 PLEKHG1Q9ULL1 1385 aa10.92□□□□□ -0.66
SMC1B-202ENST00000404354 NBPF26B4DH59 902 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 AKR1B15C9JRZ8 316 aaPredicted RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 SRGAP2O75044 1071 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 ACTN2P35609 894 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 IL15P40933 162 aaPredicted RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 RABL6Q3YEC7 729 aaPredicted RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 RESP18Q5W5W9 173 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 NBPF10Q6P3W6 841 aaKnown RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 APOA5Q6Q788 366 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 ARHGEF25Q86VW2 580 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 DIS3L2Q8IYB7 885 aaKnown RBP10.91□□□□□ -0.66
SMC1B-202ENST00000404354 NBPF15Q8N660 670 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 EPSTI1Q96J88 318 aa10.91□□□□□ -0.66
SMC1B-202ENST00000404354 CABP5Q9NP86 173 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms