RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PAK6Q9NQU5 681 aaPredicted RBP15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 SUGT1Q9Y2Z0 365 aa15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 MYH13Q9UKX3 1938 aa15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 A0A0G2JLL6 359 aaPredicted RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 CXCL11O14625 94 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PRDX5P30044 214 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 RFX5P48382 616 aaPredicted RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 UBXN2AP68543 259 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 CAVIN4Q5BKX8 364 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 Q7L0L9 218 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PRRT2Q7Z6L0 340 aaPredicted RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 CCDC84Q86UT8 332 aaPredicted RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 HOOK2Q96ED9 719 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PARK7Q99497 189 aaKnown RBP15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 GDF15Q99988 308 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 TTC28Q96AY4 2481 aa15□□□□□ -0.01
SPTLC1P3-201ENST00000403408 CDH23Q9H251 3354 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 A0A1W2PPC1 479 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 EVI5O60447 810 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PTPRAP18433 802 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 WDR63Q8IWG1 891 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 AFG3L2Q9Y4W6 797 aa14.99□□□□□ -0.01
SPTLC1P3-201ENST00000403408 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 TFRCP02786 760 aaKnown RBP14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 IRF5Q13568 498 aa14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 USP40Q9NVE5 1235 aa14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 ZHX2Q9Y6X8 837 aa14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 DOCK2Q92608 1830 aa14.98□□□□□ -0.01
SPTLC1P3-201ENST00000403408 MAST3O60307 1309 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 KIF16BQ96L93 1317 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 MAP3K10Q02779 954 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 TRIM32Q13049 653 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PUM3Q15397 648 aaKnown RBP14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 ATG9AQ7Z3C6 839 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PXYLP1Q8TE99 480 aa14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 ZMYND8Q9ULU4 1186 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1P3-201ENST00000403408 PLXNB2O15031 1838 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 MYH2Q9UKX2 1941 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 RGS3P49796 1198 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 TREML2Q5T2D2 321 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 GADL1Q6ZQY3 521 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 SCYL3Q8IZE3 742 aa14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
SPTLC1P3-201ENST00000403408 TNPO2O14787 897 aaKnown RBP14.95□□□□□ -0.02
SPTLC1P3-201ENST00000403408 BMP8BP34820 402 aa14.95□□□□□ -0.02
SPTLC1P3-201ENST00000403408 WDR66Q8TBY9 1149 aa14.95□□□□□ -0.02
SPTLC1P3-201ENST00000403408 USP44Q9H0E7 712 aa14.95□□□□□ -0.02
SPTLC1P3-201ENST00000403408 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
SPTLC1P3-201ENST00000403408 IFIT1P09914 478 aaKnown RBP14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 C7orf61Q8IZ16 206 aa14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 ANKRD13CQ8N6S4 541 aa14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 GJD2Q9UKL4 321 aa14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 SLC45A1Q9Y2W3 748 aa14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 MUC3AQ02505 3323 aa14.94□□□□□ -0.02
SPTLC1P3-201ENST00000403408 DDX60LQ5H9U9 1706 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 TRIM75PA6NK02 468 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 EYA2O00167 538 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 SYN1P17600 705 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 FASTKD5Q7L8L6 764 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 MRPL50Q8N5N7 158 aaKnown RBP14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 DEFB123Q8N688 67 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 LPIN2Q92539 896 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 IDI2Q9BXS1 227 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 MTMR10Q9NXD2 777 aa14.93□□□□□ -0.02
SPTLC1P3-201ENST00000403408 GAKO14976 1311 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 PEX10O60683 326 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 PHKA1P46020 1223 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 NECAB2Q7Z6G3 386 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 ZNF384Q8TF68 577 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
SPTLC1P3-201ENST00000403408 FAM196BA6NMK8 535 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 ENTPD3O75355 529 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 LDHBP07195 334 aaKnown RBP14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 SLC5A1P13866 664 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 ADORA1P30542 326 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 LRIT3Q3SXY7 679 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 PICK1Q9NRD5 415 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 AGTPBP1Q9UPW5 1226 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 PFASO15067 1338 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 SALL1Q9NSC2 1324 aa14.91□□□□□ -0.02
SPTLC1P3-201ENST00000403408 LOC285556D6RIA3 1793 aa14.9□□□□□ -0.02
SPTLC1P3-201ENST00000403408 FAM110CQ1W6H9 321 aa14.9□□□□□ -0.02
SPTLC1P3-201ENST00000403408 GPR153Q6NV75 609 aa14.9□□□□□ -0.02
SPTLC1P3-201ENST00000403408 SMCR8Q8TEV9 937 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1P3-201ENST00000403408 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
SPTLC1P3-201ENST00000403408 CTNND1O60716 968 aaKnown RBP14.89□□□□□ -0.03
SPTLC1P3-201ENST00000403408 RHBDL3P58872 404 aa14.89□□□□□ -0.03
SPTLC1P3-201ENST00000403408 TRIB2Q92519 343 aa14.89□□□□□ -0.03
SPTLC1P3-201ENST00000403408 COL25A1Q9BXS0 654 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1P3-201ENST00000403408 SIL1Q9H173 461 aa14.89□□□□□ -0.03
SPTLC1P3-201ENST00000403408 HMGCRP04035 888 aa14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ATP2B3Q16720 1220 aa14.88□□□□□ -0.03
SPTLC1P3-201ENST00000403408 ANKLE1Q8NAG6 615 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms