RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TMTC2Q8N394 836 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 CRNKL1Q9BZJ0 848 aaKnown RBP14.35□□□□□ -0.11
CLIP4-203ENST00000401617 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
CLIP4-203ENST00000401617 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
CLIP4-203ENST00000401617 CPLX1O14810 134 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 ZBTB43O43298 467 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 UFL1O94874 794 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 CDC27P30260 824 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 CD209Q9NNX6 404 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 TFIP11Q9UBB9 837 aaKnown RBP14.34□□□□□ -0.11
CLIP4-203ENST00000401617 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 CDKL5O76039 1030 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
CLIP4-203ENST00000401617 ILDR1Q86SU0 546 aaPredicted RBP14.34□□□□□ -0.11
CLIP4-203ENST00000401617 RAB11FIP4Q86YS3 637 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 TBC1D16Q8TBP0 767 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 DCP1AQ9NPI6 582 aaPredicted RBP14.34□□□□□ -0.11
CLIP4-203ENST00000401617 AATFQ9NY61 560 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLIP4-203ENST00000401617 CFAP45Q9UL16 551 aa14.34□□□□□ -0.11
CLIP4-203ENST00000401617 CDK5RAP2Q96SN8 1893 aa14.33□□□□□ -0.11
CLIP4-203ENST00000401617 PPP4CP60510 307 aa14.33□□□□□ -0.11
CLIP4-203ENST00000401617 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.11
CLIP4-203ENST00000401617 SEC23AQ15436 765 aa14.33□□□□□ -0.11
CLIP4-203ENST00000401617 ESR2Q92731 530 aa14.33□□□□□ -0.11
CLIP4-203ENST00000401617 GPR101Q96P66 508 aaPredicted RBP14.33□□□□□ -0.11
CLIP4-203ENST00000401617 POLLQ9UGP5 575 aa14.33□□□□□ -0.11
CLIP4-203ENST00000401617 MKRN1Q9UHC7 482 aaKnown RBP14.33□□□□□ -0.11
CLIP4-203ENST00000401617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.33□□□□□ -0.11
CLIP4-203ENST00000401617 COL11A2P13942 1736 aaPredicted RBP14.33□□□□□ -0.12
CLIP4-203ENST00000401617 SMIM22K7EJ46 135 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 LETM1O95202 739 aaPredicted RBP14.33□□□□□ -0.12
CLIP4-203ENST00000401617 SRGNP10124 158 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 WTAPQ15007 396 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 RRP12Q5JTH9 1297 aaKnown RBP14.33□□□□□ -0.12
CLIP4-203ENST00000401617 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.12
CLIP4-203ENST00000401617 C8orf76Q96K31 380 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 RCOR1Q9UKL0 485 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 SLC12A7Q9Y666 1083 aa14.33□□□□□ -0.12
CLIP4-203ENST00000401617 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 CCDC69A6NI79 296 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 USP17L12C9JPN9 530 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 USP17L21D6R901 530 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 ORC4O43929 436 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 GSTO1P78417 241 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 CPLX2Q6PUV4 134 aaKnown RBP14.32□□□□□ -0.12
CLIP4-203ENST00000401617 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 RBSNQ9H1K0 784 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 ATP6V0A2Q9Y487 856 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 CYP2D7A0A087X1C5 515 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 GOLGA8AA7E2F4 631 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 NPR1P16066 1061 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 GRIK5Q16478 980 aa14.32□□□□□ -0.12
CLIP4-203ENST00000401617 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
CLIP4-203ENST00000401617 QSER1Q2KHR3 1735 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 PPEF1O14829 653 aaPredicted RBP14.31□□□□□ -0.12
CLIP4-203ENST00000401617 IFNAR1P17181 557 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 RXRAP19793 462 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 FOSBP53539 338 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
CLIP4-203ENST00000401617 TOMM22Q9NS69 142 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
CLIP4-203ENST00000401617 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
CLIP4-203ENST00000401617 ERICH2A1L162 156 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
CLIP4-203ENST00000401617 LDHCP07864 332 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 NT5C2P49902 561 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 SYNE3Q6ZMZ3 975 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 MYH6P13533 1939 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 MMP10P09238 476 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 PDE6BP35913 854 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
CLIP4-203ENST00000401617 PPP2R5BQ15173 497 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 BRAPQ7Z569 592 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 FAM163AQ96GL9 167 aaPredicted RBP14.3□□□□□ -0.12
CLIP4-203ENST00000401617 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 MYL10Q9BUA6 226 aa14.3□□□□□ -0.12
CLIP4-203ENST00000401617 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 MROH7-TTC4A0A0A0MT08 1334 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 OTUD7BQ6GQQ9 843 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
CLIP4-203ENST00000401617 TSPY26PQ9H489 355 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 PARP3Q9Y6F1 533 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 TNKSO95271 1327 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 LIG1P18858 919 aa14.29□□□□□ -0.12
CLIP4-203ENST00000401617 ALDH1B1P30837 517 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms