RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 FGFR2P21802 821 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 MCAMP43121 646 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 RBM10P98175 930 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 C11orf57Q6ZUT1 292 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SEPT12Q8IYM1 358 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 ZNF34Q8IZ26 560 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 CACTINQ8WUQ7 758 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 PIGBQ92521 554 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 FAM89AQ96GI7 184 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 KRT23Q9C075 422 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 HOOK1Q9UJC3 728 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 TUBE1Q9UJT0 475 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 LAMB2P55268 1798 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 TCRBV5S4A2TA0A5A2 114 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 RIOK3O14730 519 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 CUTAO60888 179 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 IGSF3O75054 1194 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 ZNF202O95125 648 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SLC5A1P13866 664 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 MAP3K12Q12852 859 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 TRIM29Q14134 588 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SCARF1Q14162 830 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 CT47A1Q5JQC4 288 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 AXDND1Q5T1B0 1012 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SLC9C2Q5TAH2 1124 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SMAP1Q8IYB5 467 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 STRBPQ96SI9 672 aaKnown RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 FEZ1Q99689 392 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 STRN4Q9NRL3 753 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
LINC01139-201ENST00000400946 HPSEQ9Y251 543 aa10.12□□□□□ -0.79
LINC01139-201ENST00000400946 SPATA31A1Q5TZJ5 1347 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 PNPLA7Q6ZV29 1317 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 BRWD3Q6RI45 1802 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC196A0A1B0GTZ2 297 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
LINC01139-201ENST00000400946 ZBTB43O43298 467 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 CBFA2T2O43439 604 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 DTNBO60941 627 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 TNNT1P13805 278 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 PDE6AP16499 860 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 NT5C2P49902 561 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 METAP2P50579 478 aaKnown RBP eCLIP10.11□□□□□ -0.79
LINC01139-201ENST00000400946 NDUFA8P51970 172 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 CEBPZQ03701 1054 aaKnown RBP10.11□□□□□ -0.79
LINC01139-201ENST00000400946 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
LINC01139-201ENST00000400946 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC102BQ68D86 513 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 IGDCC4Q8TDY8 1250 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 ALG1Q9BT22 464 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
LINC01139-201ENST00000400946 GREM2Q9H772 168 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 CHD4Q14839 1912 aa10.11□□□□□ -0.79
LINC01139-201ENST00000400946 A0A0G2JLW4 131 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 POTEFA5A3E0 1075 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 PCP11498 1178 aaKnown RBP10.1□□□□□ -0.79
LINC01139-201ENST00000400946 IFNAR1P17181 557 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 IARSP41252 1262 aaKnown RBP10.1□□□□□ -0.79
LINC01139-201ENST00000400946 NTRK3Q16288 839 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 TPD52L1Q16890 204 aaPredicted RBP10.1□□□□□ -0.79
LINC01139-201ENST00000400946 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC112Q8NEF3 446 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 NRBP1Q9UHY1 535 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
LINC01139-201ENST00000400946 ASAP1Q9ULH1 1129 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 CLIC4Q9Y696 253 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 NEDD4P46934 1319 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 ZNF532Q9HCE3 1301 aa10.1□□□□□ -0.79
LINC01139-201ENST00000400946 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 A0A1B0GVL5 298 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC69A6NI79 296 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
LINC01139-201ENST00000400946 SKILP12757 684 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 SYKP43405 635 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 HAND2P61296 217 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CCZ1BP86790 482 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CCZ1P86791 482 aaPredicted RBP10.09□□□□□ -0.79
LINC01139-201ENST00000400946 GUCY1B3Q02153 619 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 LRMPQ12912 555 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
LINC01139-201ENST00000400946 PTPAQ15257 358 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 SAFBQ15424 915 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC01139-201ENST00000400946 PTPN14Q15678 1187 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 RESP18Q5W5W9 173 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 KRT40Q6A162 431 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 KANK3Q6NY19 840 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CHST3Q7LGC8 479 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 FCHSD1Q86WN1 690 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 VPS37DQ86XT2 251 aa10.09□□□□□ -0.79
LINC01139-201ENST00000400946 CCDC144CPQ8IYA2 1237 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms