RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 SLFN14P0C7P3 912 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 NFIAQ12857 509 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 EZH1Q92800 747 aaPredicted RBP7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 GAL3ST3Q96A11 431 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 SEMA6CQ9H3T2 930 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 ACSS3Q9H6R3 686 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 DISC1Q9NRI5 854 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 PCDHB5Q9Y5E4 795 aa7.75□□□□□ -1.17
SAMSN1-202ENST00000400564 DCDC2CA8MYV0 355 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 TRIM37O94972 964 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 YBX3P16989 372 aaKnown RBP eCLIP7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 TXKP42681 527 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 LIG3P49916 1009 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 LRRC14Q15048 493 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 ZC3H12AQ5D1E8 599 aaKnown RBP7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 RNF43Q68DV7 783 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 MFSD14AQ96MC6 490 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
SAMSN1-202ENST00000400564 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 DYNC1LI2O43237 492 aaPredicted RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 HCLS1P14317 486 aaPredicted RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 ST13P50502 369 aaKnown RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 MRPL58Q14197 206 aaKnown RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 TTLL4Q14679 1199 aa7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 PCDHA4Q9UN74 947 aa7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 TLR6Q9Y2C9 796 aa7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
SAMSN1-202ENST00000400564 NEFMP07197 916 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 CDK8P49336 464 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 SEPT6Q14141 434 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 PAOXQ6QHF9 649 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 C12orf40Q86WS4 652 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 FBXL6Q8N531 539 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 DBNDD2Q9BQY9 259 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 YIPF2Q9BWQ6 316 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 ATXN3LQ9H3M9 355 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 PIDD1Q9HB75 910 aa7.72□□□□□ -1.17
SAMSN1-202ENST00000400564 RNGTTO60942 597 aaKnown RBP7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 TFE3P19532 575 aaPredicted RBP7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 ADMP35318 185 aa7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 HNRNPUQ00839 825 aaKnown RBP eCLIP7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 INPP5AQ14642 412 aa7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 AGMOQ6ZNB7 445 aa7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 SHKBP1Q8TBC3 707 aa7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 PRKAG2Q9UGJ0 569 aa7.71□□□□□ -1.17
SAMSN1-202ENST00000400564 WDR64B1ANS9 1081 aa7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 GSC2O15499 205 aa7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 TGFB1P01137 390 aa7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 F13BP05160 661 aa7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 ZDHHC13Q8IUH4 622 aa7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
SAMSN1-202ENST00000400564 RPS26P62854 115 aaKnown RBP7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 ERVK-24P63145 666 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 MAP7Q14244 749 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 LRFN4Q6PJG9 635 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 SEZ6L2Q6UXD5 910 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 UBE3DQ7Z6J8 389 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 SMYD4Q8IYR2 804 aaPredicted RBP7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 GATA6Q92908 595 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 ISL2Q96A47 359 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 TBC1D32Q96NH3 1257 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 C1GALT1Q9NS00 363 aa7.7□□□□□ -1.18
SAMSN1-202ENST00000400564 RBM47A0AV96 593 aaKnown RBP7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 NTF4P34130 210 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 LDLRAD1Q5T700 205 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 RNF214Q8ND24 703 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 RGS22Q8NE09 1264 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 ELMO3Q96BJ8 720 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 PLPPR2Q96GM1 343 aa7.69□□□□□ -1.18
SAMSN1-202ENST00000400564 PRR19A6NJB7 356 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 FAM170BA6NMN3 283 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 LMNB1P20700 586 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 RING1Q06587 406 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 CDK5R2Q13319 367 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 ZAR1Q86SH2 424 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 COPRSQ9NQ92 184 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 RNF112Q9ULX5 631 aa7.68□□□□□ -1.18
SAMSN1-202ENST00000400564 PRAMEF27A3QJZ7 478 aa7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 WIPI1Q5MNZ9 446 aaPredicted RBP7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 SCARA3Q6AZY7 606 aa7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 SLC51AQ86UW1 340 aa7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 JARID2Q92833 1246 aaPredicted RBP7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 PICK1Q9NRD5 415 aa7.67□□□□□ -1.18
SAMSN1-202ENST00000400564 PF4P02776 101 aa7.66□□□□□ -1.18
SAMSN1-202ENST00000400564 GBP2P32456 591 aaPredicted RBP7.66□□□□□ -1.18
SAMSN1-202ENST00000400564 ITGAEP38570 1179 aa7.66□□□□□ -1.18
SAMSN1-202ENST00000400564 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
SAMSN1-202ENST00000400564 SSU72Q9NP77 194 aaKnown RBP7.66□□□□□ -1.18
SAMSN1-202ENST00000400564 COL17A1Q9UMD9 1497 aaPredicted RBP7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 MINDY4BA8MYZ0 360 aa7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 RLBP1P12271 317 aa7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 SSTR4P31391 388 aa7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 FAM160A1Q05DH4 1040 aa7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 LCE1DQ5T752 114 aa7.65□□□□□ -1.18
SAMSN1-202ENST00000400564 ZBTB37Q5TC79 503 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms