RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 UTYO14607 1347 aa22.71■■□□□ 1.23
UFD1-202ENST00000399523 PTPRFP10586 1907 aa22.7■■□□□ 1.23
UFD1-202ENST00000399523 NBPF7P0C2Y1 421 aaPredicted RBP22.7■■□□□ 1.22
UFD1-202ENST00000399523 PTPRAP18433 802 aa22.7■■□□□ 1.22
UFD1-202ENST00000399523 Q7L0L9 218 aa22.7■■□□□ 1.22
UFD1-202ENST00000399523 SCYL3Q8IZE3 742 aa22.7■■□□□ 1.22
UFD1-202ENST00000399523 MTMR10Q9NXD2 777 aa22.7■■□□□ 1.22
UFD1-202ENST00000399523 ATRNL1Q5VV63 1379 aa22.7■■□□□ 1.22
UFD1-202ENST00000399523 FGFR2P21802 821 aa22.69■■□□□ 1.22
UFD1-202ENST00000399523 C7orf61Q8IZ16 206 aa22.69■■□□□ 1.22
UFD1-202ENST00000399523 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.69■■□□□ 1.227e-7■■■■■ 41.3
UFD1-202ENST00000399523 BICC1Q9H694 974 aaKnown RBP22.69■■□□□ 1.22
UFD1-202ENST00000399523 ZMYND8Q9ULU4 1186 aaPredicted RBP22.69■■□□□ 1.22
UFD1-202ENST00000399523 IFIT1P09914 478 aaKnown RBP22.68■■□□□ 1.22
UFD1-202ENST00000399523 PUM3Q15397 648 aaKnown RBP22.68■■□□□ 1.22
UFD1-202ENST00000399523 DIXDC1Q155Q3 683 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 SLC4A10Q6U841 1118 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 GADL1Q6ZQY3 521 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 ZFPM1Q8IX07 1006 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 SMCR8Q8TEV9 937 aaPredicted RBP22.68■■□□□ 1.22
UFD1-202ENST00000399523 COA7Q96BR5 231 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 PICK1Q9NRD5 415 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 MYH13Q9UKX3 1938 aa22.68■■□□□ 1.22
UFD1-202ENST00000399523 MAP3K10Q02779 954 aa22.67■■□□□ 1.22
UFD1-202ENST00000399523 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
UFD1-202ENST00000399523 USP40Q9NVE5 1235 aa22.67■■□□□ 1.22
UFD1-202ENST00000399523 WDR63Q8IWG1 891 aa22.66■■□□□ 1.22
UFD1-202ENST00000399523 TDHQ8IZJ6 230 aa22.66■■□□□ 1.22
UFD1-202ENST00000399523 NBPF3Q9H094 633 aa22.66■■□□□ 1.22
UFD1-202ENST00000399523 MAGEA10P43363 369 aaPredicted RBP22.65■■□□□ 1.22
UFD1-202ENST00000399523 FAM110CQ1W6H9 321 aa22.65■■□□□ 1.22
UFD1-202ENST00000399523 ANKRD13CQ8N6S4 541 aa22.65■■□□□ 1.22
UFD1-202ENST00000399523 COL25A1Q9BXS0 654 aaPredicted RBP22.65■■□□□ 1.22
UFD1-202ENST00000399523 TAOK2Q9UL54 1235 aa22.65■■□□□ 1.22
UFD1-202ENST00000399523 PHIPQ8WWQ0 1821 aa22.65■■□□□ 1.22
UFD1-202ENST00000399523 DOCK2Q92608 1830 aa22.64■■□□□ 1.22
UFD1-202ENST00000399523 HMGCRP04035 888 aa22.64■■□□□ 1.21
UFD1-202ENST00000399523 PRDX5P30044 214 aa22.64■■□□□ 1.21
UFD1-202ENST00000399523 IDI2Q9BXS1 227 aa22.64■■□□□ 1.21
UFD1-202ENST00000399523 AGTPBP1Q9UPW5 1226 aa22.64■■□□□ 1.21
UFD1-202ENST00000399523 VCANP13611 3396 aa22.64■■□□□ 1.21
UFD1-202ENST00000399523 RPTORQ8N122 1335 aa22.63■■□□□ 1.21
UFD1-202ENST00000399523 LAMA2P24043 3122 aaKnown RBP22.63■■□□□ 1.21
UFD1-202ENST00000399523 ENTPD3O75355 529 aa22.63■■□□□ 1.21
UFD1-202ENST00000399523 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
UFD1-202ENST00000399523 KLHDC4Q8TBB5 520 aa22.63■■□□□ 1.21
UFD1-202ENST00000399523 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
UFD1-202ENST00000399523 SYN1P17600 705 aa22.62■■□□□ 1.21
UFD1-202ENST00000399523 RGS3P49796 1198 aa22.62■■□□□ 1.21
UFD1-202ENST00000399523 CCDC184Q52MB2 194 aa22.62■■□□□ 1.21
UFD1-202ENST00000399523 SH3BP5LQ7L8J4 393 aa22.62■■□□□ 1.21
UFD1-202ENST00000399523 LPIN2Q92539 896 aa22.62■■□□□ 1.21
UFD1-202ENST00000399523 TRIM75PA6NK02 468 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 LDHBP07195 334 aaKnown RBP22.61■■□□□ 1.21
UFD1-202ENST00000399523 SLC5A1P13866 664 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 DOCK1Q14185 1865 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 C11orf49Q9H6J7 331 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 HMX1Q9NP08 348 aaPredicted RBP22.61■■□□□ 1.21
UFD1-202ENST00000399523 GJD2Q9UKL4 321 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 OGDHLQ9ULD0 1010 aa22.61■■□□□ 1.21
UFD1-202ENST00000399523 LRRFIP2Q9Y608 721 aaKnown RBP22.61■■□□□ 1.21
UFD1-202ENST00000399523 SALL1Q9NSC2 1324 aa22.6■■□□□ 1.21
UFD1-202ENST00000399523 DDX60LQ5H9U9 1706 aaKnown RBP22.6■■□□□ 1.21
UFD1-202ENST00000399523 UBE2OQ9C0C9 1292 aaKnown RBP22.6■■□□□ 1.21
UFD1-202ENST00000399523 PNMA3Q9UL41 463 aa22.6■■□□□ 1.21
UFD1-202ENST00000399523 RFX7Q2KHR2 1363 aa22.6■■□□□ 1.21
UFD1-202ENST00000399523 TREML2Q5T2D2 321 aa22.59■■□□□ 1.21
UFD1-202ENST00000399523 SPINK5Q9NQ38 1064 aaPredicted RBP22.59■■□□□ 1.21
UFD1-202ENST00000399523 MYH2Q9UKX2 1941 aa22.59■■□□□ 1.21
UFD1-202ENST00000399523 GCLCP48506 637 aaPredicted RBP22.58■■□□□ 1.21
UFD1-202ENST00000399523 TRIM32Q13049 653 aa22.58■■□□□ 1.21
UFD1-202ENST00000399523 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.58■■□□□ 1.21
UFD1-202ENST00000399523 PROCA1Q8NCQ7 364 aaPredicted RBP22.58■■□□□ 1.21
UFD1-202ENST00000399523 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
UFD1-202ENST00000399523 EYA2O00167 538 aa22.57■■□□□ 1.2
UFD1-202ENST00000399523 SLURP2P0DP57 97 aa22.57■■□□□ 1.2
UFD1-202ENST00000399523 ZSCAN29Q8IWY8 852 aaPredicted RBP22.57■■□□□ 1.2
UFD1-202ENST00000399523 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.57■■□□□ 1.2
UFD1-202ENST00000399523 GAKO14976 1311 aa22.57■■□□□ 1.2
UFD1-202ENST00000399523 RFX5P48382 616 aaPredicted RBP22.56■■□□□ 1.2
UFD1-202ENST00000399523 MAP3K21Q5TCX8 1036 aa22.56■■□□□ 1.2
UFD1-202ENST00000399523 FAM109BQ6ICB4 259 aaPredicted RBP22.56■■□□□ 1.2
UFD1-202ENST00000399523 CCDC84Q86UT8 332 aaPredicted RBP22.56■■□□□ 1.2
UFD1-202ENST00000399523 GNL3LQ9NVN8 582 aaKnown RBP22.56■■□□□ 1.2
UFD1-202ENST00000399523 PFASO15067 1338 aa22.56■■□□□ 1.2
UFD1-202ENST00000399523 POTEB2H3BUK9 544 aa22.55■■□□□ 1.2
UFD1-202ENST00000399523 ZBTB22O15209 634 aa22.55■■□□□ 1.2
UFD1-202ENST00000399523 PLXNB2O15031 1838 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 SEMA3EO15041 775 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 TBC1D12O60347 775 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 ATG9AQ7Z3C6 839 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 TRIB2Q92519 343 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 DDX4Q9NQI0 724 aaKnown RBP22.54■■□□□ 1.2
UFD1-202ENST00000399523 DENND2AQ9ULE3 1009 aa22.54■■□□□ 1.2
UFD1-202ENST00000399523 LOC285556D6RIA3 1793 aa22.53■■□□□ 1.2
UFD1-202ENST00000399523 DNAH12Q6ZR08 3092 aa22.53■■□□□ 1.2
UFD1-202ENST00000399523 COL6A1P12109 1028 aa22.53■■□□□ 1.2
UFD1-202ENST00000399523 FAM163AQ96GL9 167 aaPredicted RBP22.53■■□□□ 1.2
UFD1-202ENST00000399523 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
UFD1-202ENST00000399523 SALL2Q9Y467 1007 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms