RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 RBM5P52756 815 aaKnown RBP eCLIP19.29■□□□□ 0.681e-6■■□□□ 11.4
TNRC18-202ENST00000399434 CTDSPL2Q05D32 466 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 NFIAQ12857 509 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 DPF2Q92785 391 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 TM6SF1Q9BZW5 370 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 HDAC9Q9UKV0 1011 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 NEDD4P46934 1319 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 ROBO3Q96MS0 1386 aa19.29■□□□□ 0.68
TNRC18-202ENST00000399434 USP17L12C9JPN9 530 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 USP17L21D6R901 530 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 GRIN3BO60391 1043 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 CACNB3P54284 484 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 PPARAQ07869 468 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 SBK1Q52WX2 424 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 MICALL2Q8IY33 904 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 GPC2Q8N158 579 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 TDRD3Q9H7E2 651 aaKnown RBP19.28■□□□□ 0.68
TNRC18-202ENST00000399434 ZSWIM6Q9HCJ5 1215 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 ANAPC4Q9UJX5 808 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 MYH8P13535 1937 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 ZNF213O14771 459 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
TNRC18-202ENST00000399434 INCENPQ9NQS7 918 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 ARPP21Q9UBL0 812 aaPredicted RBP19.28■□□□□ 0.68
TNRC18-202ENST00000399434 FAM198AQ9UFP1 575 aa19.28■□□□□ 0.68
TNRC18-202ENST00000399434 SAP30BPQ9UHR5 308 aaKnown RBP19.28■□□□□ 0.68
TNRC18-202ENST00000399434 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.67
TNRC18-202ENST00000399434 KRT32Q14532 448 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 DLGAP5Q15398 846 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 OGFOD1Q8N543 542 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 TTC14Q96N46 770 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 IDI2Q9BXS1 227 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 MYOZ2Q9NPC6 264 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 MCM9Q9NXL9 1143 aa19.27■□□□□ 0.67
TNRC18-202ENST00000399434 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 PICALMQ13492 652 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 SLC4A8Q2Y0W8 1093 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 SPDYE2Q495Y8 402 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 C12orf60Q5U649 245 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 ZFPM1Q8IX07 1006 aa19.26■□□□□ 0.67
TNRC18-202ENST00000399434 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
TNRC18-202ENST00000399434 CNOT7Q9UIV1 285 aaKnown RBP19.26■□□□□ 0.67
TNRC18-202ENST00000399434 COL2A1P02458 1487 aaPredicted RBP19.26■□□□□ 0.67
TNRC18-202ENST00000399434 DDNO94850 711 aaPredicted RBP19.25■□□□□ 0.67
TNRC18-202ENST00000399434 NEK4P51957 841 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 NBPF9Q3BBW0 867 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 STAG1Q8WVM7 1258 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 NEK1Q96PY6 1258 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 OSBPL5Q9H0X9 879 aaPredicted RBP19.25■□□□□ 0.67
TNRC18-202ENST00000399434 GPRC5DQ9NZD1 345 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 ZNF70Q9UC06 446 aaPredicted RBP19.25■□□□□ 0.67
TNRC18-202ENST00000399434 CNTNAP1P78357 1384 aa19.25■□□□□ 0.67
TNRC18-202ENST00000399434 CLRN2A0PK11 232 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 WNT10BO00744 389 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
TNRC18-202ENST00000399434 RPS6KB1P23443 525 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 PLCD1P51178 756 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 ANTXR2P58335 489 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 RUFY3Q7L099 469 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 SAMD7Q7Z3H4 446 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 TCEANC2Q96MN5 208 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.24■□□□□ 0.673e-6■■■■□ 19.4
TNRC18-202ENST00000399434 ASTN2O75129 1339 aaPredicted RBP19.24■□□□□ 0.67
TNRC18-202ENST00000399434 ZC3H4Q9UPT8 1303 aaKnown RBP19.24■□□□□ 0.67
TNRC18-202ENST00000399434 WDR90Q96KV7 1748 aa19.24■□□□□ 0.67
TNRC18-202ENST00000399434 FGRP09769 529 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 MMP14P50281 582 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 BLOC1S2Q6QNY1 142 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 SH3BP5LQ7L8J4 393 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 STK11IPQ8N1F8 1099 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 TRPM4Q8TD43 1214 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 SNX21Q969T3 373 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 TBC1D2Q9BYX2 928 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 ATRNL1Q5VV63 1379 aa19.23■□□□□ 0.67
TNRC18-202ENST00000399434 GREB1LQ9C091 1923 aaPredicted RBP19.23■□□□□ 0.67
TNRC18-202ENST00000399434 PSMA5P28066 241 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
TNRC18-202ENST00000399434 DYNLL2Q96FJ2 89 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 CYP46A1Q9Y6A2 500 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 SCN4AP35499 1836 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 B4E1Z4 1266 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 EPS15P42566 896 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 EXOSC10Q01780 885 aaKnown RBP19.22■□□□□ 0.67
TNRC18-202ENST00000399434 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
TNRC18-202ENST00000399434 TCP10Q12799 353 aa19.21■□□□□ 0.67
TNRC18-202ENST00000399434 RBM26Q5T8P6 1007 aaKnown RBP19.21■□□□□ 0.67
TNRC18-202ENST00000399434 SLC44A5Q8NCS7 719 aa19.21■□□□□ 0.67
TNRC18-202ENST00000399434 NCOA7Q8NI08 942 aa19.21■□□□□ 0.67
TNRC18-202ENST00000399434 DDTLA6NHG4 134 aaPredicted RBP19.2■□□□□ 0.66
TNRC18-202ENST00000399434 ENTPD3O75355 529 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 PRDM1O75626 825 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 POLR3DP05423 398 aaPredicted RBP19.2■□□□□ 0.66
TNRC18-202ENST00000399434 SLURP2P0DP57 97 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 AK2P54819 239 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 GABPAQ06546 454 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
TNRC18-202ENST00000399434 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms