RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 BRF1Q92994 677 aa12.52□□□□□ -0.41
ITSN1-207ENST00000399338 PHACTR3Q96KR7 559 aa12.52□□□□□ -0.41
ITSN1-207ENST00000399338 LZTFL1Q9NQ48 299 aa12.52□□□□□ -0.41
ITSN1-207ENST00000399338 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.52□□□□□ -0.41
ITSN1-207ENST00000399338 ARAP3Q8WWN8 1544 aa12.52□□□□□ -0.41
ITSN1-207ENST00000399338 IFFO1Q0D2I5 559 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 NECTIN1Q15223 517 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 HHATQ5VTY9 493 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 GOLGA6BA6NDN3 693 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 SPDYE3A6NKU9 549 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 MGRN1O60291 552 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 MTF1Q14872 753 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 CCDC181Q5TID7 509 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 TBC1D5Q92609 795 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 GOLGA6L7A0A1B0GV03 622 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ECEL1O95672 775 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 HMGB1P09429 215 aaKnown RBP12.51□□□□□ -0.41
ITSN1-207ENST00000399338 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 PDCLQ13371 301 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ZNF569Q5MCW4 686 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 SLC30A9Q6PML9 568 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
ITSN1-207ENST00000399338 OSBPL9Q96SU4 736 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 SELENOOQ9BVL4 669 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 KDM4CQ9H3R0 1056 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 BLOC1S6Q9UL45 172 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
ITSN1-207ENST00000399338 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 KDRP35968 1356 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 TARSL2A2RTX5 802 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 SLC4A2P04920 1241 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 EPB41P11171 864 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 NSMCE1Q8WV22 266 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 MRPS27Q92552 414 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 CCDC114Q96M63 670 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 EPN3Q9H201 632 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 SETBP1Q9Y6X0 1596 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 ZSCAN9O15535 394 aaPredicted RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 MYO1BO43795 1136 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 SSBP05455 408 aaKnown RBP eCLIP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 ADKP55263 362 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 FBLN2P98095 1184 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 AMPD2Q01433 879 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 TOB2Q14106 344 aaPredicted RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 ANKRD1Q15327 319 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 CCDC47Q96A33 483 aaKnown RBP12.5□□□□□ -0.41
ITSN1-207ENST00000399338 PLEKHG4BQ96PX9 1271 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 RGL1Q9NZL6 768 aa12.5□□□□□ -0.41
ITSN1-207ENST00000399338 PNMA6EA0A0J9YXQ4 647 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 LIN7AO14910 233 aaPredicted RBP12.49□□□□□ -0.41
ITSN1-207ENST00000399338 JAK2O60674 1132 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 GNAI2P04899 355 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 AKAP17AQ02040 695 aaKnown RBP12.49□□□□□ -0.41
ITSN1-207ENST00000399338 SLC35F6Q8N357 371 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 TRIM58Q8NG06 486 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 B4GALNT2Q8NHY0 566 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 EPAS1Q99814 870 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 HAUS2Q9NVX0 235 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 ATL3Q6DD88 541 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
ITSN1-207ENST00000399338 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
ITSN1-207ENST00000399338 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 LINGO3P0C6S8 592 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 PAPOLAP51003 745 aaKnown RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 NDUFA8P51970 172 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 IFT88Q13099 833 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 CNTROBQ8N137 903 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 PDILTQ8N807 584 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 PUS7Q96PZ0 661 aaKnown RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 CHD1O14646 1710 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 H3BQV1 296 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 LSP1P33241 339 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 CD151P48509 253 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 ROR2Q01974 943 aaKnown RBP12.48□□□□□ -0.41
ITSN1-207ENST00000399338 MYL5Q02045 173 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 XRCC4Q13426 336 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 MKL1Q969V6 931 aa12.48□□□□□ -0.41
ITSN1-207ENST00000399338 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms