RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CNGA1P29973 690 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 ZNF75DP51815 510 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 RUFY4Q6ZNE9 571 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 RAB11FIP4Q86YS3 637 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 TESK2Q96S53 571 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 PAIP2Q9BPZ3 127 aaKnown RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 ZSWIM4Q9H7M6 989 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 SHROOM2Q13796 1616 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 EYA2O00167 538 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 LMOD1P29536 600 aaPredicted RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 ZBTB16Q05516 673 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 INTS8Q75QN2 995 aaKnown RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 CCDC63Q8NA47 563 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 KDM3AQ9Y4C1 1321 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 ATP10AO60312 1499 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 IGSF22Q8N9C0 903 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 SEC62Q99442 399 aaKnown RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 ARHGEF10LQ9HCE6 1279 aa9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
SPTLC3-201ENST00000399002 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 PDE8AO60658 829 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ADAMTS2O95450 1211 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 SPATS2Q86XZ4 545 aaKnown RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 SECISBP2LQ93073 1101 aaKnown RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 LRRC2Q9BYS8 371 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 FAM169AQ9Y6X4 670 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 FAM135BQ49AJ0 1406 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 TNFAIP3P21580 790 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ARHGAP25P42331 645 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 CFAP157Q5JU67 520 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 KCNH3Q9ULD8 1083 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 SNX14Q9Y5W7 946 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 DDB1Q16531 1140 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 PPP2R5EQ16537 467 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 C10orf67Q8IYJ2 551 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ZNF830Q96NB3 372 aaPredicted RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 MKRN1Q9UHC7 482 aaKnown RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ANGEL1Q9UNK9 670 aaKnown RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 ARHGAP6O43182 974 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 YWHAEP62258 255 aaKnown RBP9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 CCDC114Q96M63 670 aa9.35□□□□□ -0.91
SPTLC3-201ENST00000399002 CCT6AP40227 531 aaKnown RBP9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 SLC8A3P57103 927 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 EVCP57679 992 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 PICALMQ13492 652 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 C8orf74Q6P047 294 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 SKAP1Q86WV1 359 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 UBLCP1Q8WVY7 318 aaPredicted RBP9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 PNMA2Q9UL42 364 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 GMNNO75496 209 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 SUPT20HQ8NEM7 779 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 CAPZA3Q96KX2 299 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 PDE4DQ08499 809 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 C16orf71Q8IYS4 520 aaPredicted RBP9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 WDR66Q8TBY9 1149 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 HMGB1P1B2RPK0 211 aaPredicted RBP9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 MBD4O95243 580 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 IL13P35225 146 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 SH3BGRP55822 239 aaPredicted RBP9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 PAK2Q13177 524 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 SLC9C1Q4G0N8 1177 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 GALNT17Q6IS24 598 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 STMN2Q93045 179 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 RUNDC3BQ96NL0 473 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 LZTFL1Q9NQ48 299 aa9.34□□□□□ -0.91
SPTLC3-201ENST00000399002 FANCCQ00597 558 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 KARSQ15046 597 aaKnown RBP9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 TTC38Q5R3I4 469 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 SRGAP1Q7Z6B7 1085 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 GPATCH11Q8N954 259 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 MYRIPQ8NFW9 859 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 ZKSCAN3Q9BRR0 538 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 PA2G4Q9UQ80 394 aaKnown RBP9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 KDRP35968 1356 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 SGSM2O43147 1006 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 WHAMMP3Q1A5X7 153 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 ADCY7P51828 1080 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 STRN3Q13033 797 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 TRPC3Q13507 836 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 C19orf44Q9H6X5 657 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 MYO5CQ9NQX4 1742 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 CETN3O15182 167 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 CDC25BP30305 580 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 LMNTD2Q8IXW0 634 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 IFT81Q8WYA0 676 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 FNBP1Q96RU3 617 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 MAGEF1Q9HAY2 307 aa9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPTLC3-201ENST00000399002 TBX22Q9Y458 520 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms