RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 PROCA1Q8NCQ7 364 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 TEKT1Q969V4 418 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 PLIN2Q99541 437 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 FAM107BQ9H098 131 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 CEP170BQ9Y4F5 1589 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 CCDC175P0C221 793 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 ZSCAN22P10073 491 aaPredicted RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 SPON1Q9HCB6 807 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 PIM2Q9P1W9 311 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 MBD4O95243 580 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 MMP10P09238 476 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 TCP10Q12799 353 aa16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 TTF2Q9UNY4 1162 aaKnown RBP16.12■□□□□ 0.17
PCDHA11-201ENST00000398640 CEP85Q6P2H3 762 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 SUCLG2Q96I99 432 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 RTL9Q8NET4 1388 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 CRB1P82279 1406 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 CHMP2AO43633 222 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 FERP16591 822 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 KDM4FA0A1W2PPD8 638 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 NEURL1BA8MQ27 555 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 CCDC172P0C7W6 258 aa16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 FNBP4Q8N3X1 1017 aaPredicted RBP16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 PAIP2Q9BPZ3 127 aaKnown RBP16.11■□□□□ 0.17
PCDHA11-201ENST00000398640 EEF2P13639 858 aaKnown RBP16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 MCM7P33993 719 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TNNI3KQ59H18 835 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TICAM2Q86XR7 235 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 AS3MTQ9HBK9 375 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TRIM35Q9UPQ4 493 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 FPGT-TNNI3KV9GXZ4 949 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TULP4Q9NRJ4 1543 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TTLL6Q8N841 843 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 PDE1AP54750 535 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 ANO6Q4KMQ2 910 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 FCHSD1Q86WN1 690 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 LRRC45Q96CN5 670 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 MFSD14BQ5SR56 506 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 SPOUT1Q5T280 376 aaKnown RBP16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 TIMM10P62072 90 aa16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 IRX3P78415 501 aaPredicted RBP16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 IFI16Q16666 785 aaKnown RBP16.1■□□□□ 0.17
PCDHA11-201ENST00000398640 PCCAP05165 728 aaPredicted RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 PARP1P09874 1014 aaKnown RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 MYCLP12524 364 aaPredicted RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 NEMFO60524 1076 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 OTUD7BQ6GQQ9 843 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 USP40Q9NVE5 1235 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 CGNQ9P2M7 1197 aaKnown RBP16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 CEP135Q66GS9 1140 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 RTKN2Q8IZC4 609 aa16.09■□□□□ 0.17
PCDHA11-201ENST00000398640 NPR1P16066 1061 aa16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 RPS6KA4O75676 772 aa16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 CCDC117Q8IWD4 279 aaPredicted RBP16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 PCDHB15Q9Y5E8 787 aa16.08■□□□□ 0.17
PCDHA11-201ENST00000398640 ATP2C2O75185 946 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 APOBRQ0VD83 1088 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 TXNRD1Q16881 649 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 GSTA5Q7RTV2 222 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 KDRP35968 1356 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 BRDTQ58F21 947 aaPredicted RBP16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 SPATA5Q8NB90 893 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 XDHP47989 1333 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.16
PCDHA11-201ENST00000398640 NOP56O00567 594 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 KRT2P35908 639 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 ERFEQ4G0M1 354 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 GIMAP7Q8NHV1 300 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 KCNG4Q8TDN1 519 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 KRT79Q5XKE5 535 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 CCDC50Q8IVM0 306 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 DDX39AO00148 427 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 TBC1D32Q96NH3 1257 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 BBOX1O75936 387 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 R3HDM1Q15032 1099 aaKnown RBP16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 AOPEPQ8N6M6 819 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 KLHDC4Q8TBB5 520 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
PCDHA11-201ENST00000398640 TCP10L2B9ZVM9 353 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 ZBED4O75132 1171 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 ABT1Q9ULW3 272 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 SRRTQ9BXP5 876 aaKnown RBP16.06■□□□□ 0.16
PCDHA11-201ENST00000398640 ARMT1Q9H993 441 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms