RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 DEXIO95424 95 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 DZIP3Q86Y13 1208 aaKnown RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 JAG2Q9Y219 1238 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 MAPKBP1O60336 1514 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 CLUL1Q15846 466 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 MAP3K5Q99683 1374 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 ZNF131P52739 623 aa13.18□□□□□ -0.3
TMF1-201ENST00000398559 LLPHQ9BRT6 129 aaKnown RBP13.18□□□□□ -0.3
TMF1-201ENST00000398559 HSPA1LP34931 641 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 SNX16P57768 344 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 BEND3Q5T5X7 828 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 SEPT14Q6ZU15 432 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 CEP128Q6ZU80 1094 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 VPS52Q8N1B4 723 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 LRRC59Q96AG4 307 aaKnown RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 ZNF202O95125 648 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 WDR44Q5JSH3 913 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 FEZ2Q9UHY8 353 aaPredicted RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 CUTAO60888 179 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 GMNNO75496 209 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 PLCG2P16885 1265 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 SP4Q02446 784 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 RASA3Q14644 834 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 KLHL7Q8IXQ5 586 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 ARHGEF2Q92974 986 aaKnown RBP13.17□□□□□ -0.3
TMF1-201ENST00000398559 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 E7EVH7 732 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
TMF1-201ENST00000398559 CALUO43852 315 aaPredicted RBP13.16□□□□□ -0.3
TMF1-201ENST00000398559 MTX1Q13505 466 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 PSMB7Q99436 277 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 SAP30BPQ9UHR5 308 aaKnown RBP13.16□□□□□ -0.3
TMF1-201ENST00000398559 CLGNO14967 610 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
TMF1-201ENST00000398559 BIRC3Q13489 604 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
TMF1-201ENST00000398559 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 TAB2Q9NYJ8 693 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 FAM204AQ9H8W3 233 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 A6NNZ2 444 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 SF3A3Q12874 501 aaKnown RBP eCLIP13.16□□□□□ -0.33e-9■■■■■ 42.8
TMF1-201ENST00000398559 TUBB8Q3ZCM7 444 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 TAOK1Q7L7X3 1001 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 MLKLQ8NB16 471 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 PHACTR3Q96KR7 559 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 GEN1Q17RS7 908 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 OTUD7BQ6GQQ9 843 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
TMF1-201ENST00000398559 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 TMTC1Q8IUR5 882 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 EIF2AK4Q9P2K8 1649 aaKnown RBP13.15□□□□□ -0.3
TMF1-201ENST00000398559 GAS8O95995 478 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 ARHGAP6O43182 974 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 CEP104O60308 925 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 CRCPO75575 148 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 ARHGAP25P42331 645 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 CHMP2AO43633 222 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
TMF1-201ENST00000398559 MCUR1Q96AQ8 359 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 KDM5BQ9UGL1 1544 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 BACH1O14867 736 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 STX10O60499 249 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 DTNBO60941 627 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 SLC9C1Q4G0N8 1177 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 VCX3BQ9H321 246 aa13.15□□□□□ -0.3
TMF1-201ENST00000398559 CCT6BQ92526 530 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 ARMT1Q9H993 441 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 POSTNQ15063 836 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 G2E3Q7L622 706 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 CABS1Q96KC9 395 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 TXKP42681 527 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 PAK2Q13177 524 aa13.14□□□□□ -0.31
TMF1-201ENST00000398559 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms