RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 DDR1Q08345 913 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 APOA5Q6Q788 366 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 MRIQ9BWK5 157 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 TMX4Q9H1E5 349 aaPredicted RBP8.62□□□□□ -1.03
RGPD1-201ENST00000398193 TAF1P21675 1872 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 GAKO14976 1311 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 STK3Q13188 491 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 MASTLQ96GX5 879 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 EYA3Q99504 573 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 RTEL1Q9NZ71 1219 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 RCOR1Q9UKL0 485 aa8.62□□□□□ -1.03
RGPD1-201ENST00000398193 COL2A1P02458 1487 aaPredicted RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 PDE4BQ07343 736 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 SSRP1Q08945 709 aaKnown RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 WTAPQ15007 396 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 RBM43Q6ZSC3 357 aaKnown RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 PROM2Q8N271 834 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 KIF13BQ9NQT8 1826 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 MYO3BQ8WXR4 1341 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 IFNAR1P17181 557 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 KCNQ4P56696 695 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 HS1BP3Q53T59 392 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 PPP4R3BQ5MIZ7 849 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 LEO1Q8WVC0 666 aaPredicted RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 A0A1W2PQ27 194 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 A0A1W2PQ64 194 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 A0A1W2PQD8 194 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 GOLGA8AA7E2F4 631 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 JAK2O60674 1132 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 YEATS4O95619 227 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 HAND2P61296 217 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 ELOA2Q8IYF1 753 aaPredicted RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 IFIT3O14879 490 aaKnown RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
RGPD1-201ENST00000398193 CTR9Q6PD62 1173 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 ADGRA1Q86SQ6 560 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 C8orf76Q96K31 380 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 PPP1R9BQ96SB3 815 aa8.61□□□□□ -1.03
RGPD1-201ENST00000398193 A0A0G2JLW4 131 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 XRCC6P12956 609 aaKnown RBP eCLIP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 SEC23AQ15436 765 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 B4E1Z4 1266 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 FDPSP14324 419 aaKnown RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 NFXL1Q6ZNB6 911 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 TBC1D16Q8TBP0 767 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 KCNG4Q8TDN1 519 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 TCEANC2Q96MN5 208 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 UBAC1Q9BSL1 405 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 RTFDC1Q9BY42 306 aaPredicted RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 PLIN4Q96Q06 1357 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 UFL1O94874 794 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 DEXIO95424 95 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 APBA3O96018 575 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 ZNF827Q17R98 1081 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 FBXO18Q8NFZ0 1043 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 TMEM63CQ9P1W3 806 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 ZSWIM5Q9P217 1185 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 MKRN1Q9UHC7 482 aaKnown RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 GPR75-ASB3A0A0A6YYF3 556 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 CTDSPL2Q05D32 466 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 TRIM29Q14134 588 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 IQCA1Q86XH1 822 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 RNF26Q9BY78 433 aaPredicted RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 CD209Q9NNX6 404 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 ORC3Q9UBD5 711 aaPredicted RBP8.6□□□□□ -1.03
RGPD1-201ENST00000398193 ABCF2Q9UG63 623 aa8.6□□□□□ -1.03
RGPD1-201ENST00000398193 ADD1P35611 737 aaKnown RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 NTRK3Q16288 839 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 RTN1Q16799 776 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 COL23A1Q86Y22 540 aaPredicted RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 SUPT20HQ8NEM7 779 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 DCP1AQ9NPI6 582 aaPredicted RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 SRGNP10124 158 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 FAM182BQ5T319 152 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 PSME4Q14997 1843 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 XBP1P17861 261 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 COL9A3Q14050 684 aaPredicted RBP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 CATIPQ7Z7H3 387 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 ZNF384Q8TF68 577 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 LRRC2Q9BYS8 371 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 CLSTN2Q9H4D0 955 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 SH3GLB2Q9NR46 395 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 KAT6BQ8WYB5 2073 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 PRKAB2O43741 272 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 KDM4AO75164 1064 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 PPP6R2O75170 966 aa8.59□□□□□ -1.03
RGPD1-201ENST00000398193 U2AF2P26368 475 aaKnown RBP eCLIP8.59□□□□□ -1.03
RGPD1-201ENST00000398193 SMARCA1P28370 1054 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms