RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TICAM2Q86XR7 235 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 JRKLQ9Y4A0 524 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 PHLPP2Q6ZVD8 1323 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 ZNF213O14771 459 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 SYKP43405 635 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 DPF2Q92785 391 aa18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
CHMP1A-201ENST00000397901 EFCAB8A8MWE9 144 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 GPAA1O43292 621 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 IVLP07476 585 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 ACTN2P35609 894 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 TTC31Q49AM3 519 aaPredicted RBP18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 NKX2-3Q8TAU0 364 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 HSD3B7Q9H2F3 369 aa18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.53
CHMP1A-201ENST00000397901 TADA3O75528 432 aa18.33■□□□□ 0.52
CHMP1A-201ENST00000397901 DHX8Q14562 1220 aaKnown RBP18.33■□□□□ 0.52
CHMP1A-201ENST00000397901 SLC39A14Q15043 492 aa18.33■□□□□ 0.52
CHMP1A-201ENST00000397901 APPBP2Q92624 585 aa18.33■□□□□ 0.52
CHMP1A-201ENST00000397901 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
CHMP1A-201ENST00000397901 CLGNO14967 610 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 SASH3O75995 380 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 MAGEA9P43362 315 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 PNOCQ13519 176 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 CC2D1AQ6P1N0 951 aaPredicted RBP18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 SERPINC1P01008 464 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 VPS37DQ86XT2 251 aa18.32■□□□□ 0.52
CHMP1A-201ENST00000397901 CCP110O43303 1012 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 LMAN1P49257 510 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 UBASH3AP57075 661 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 ETF1P62495 437 aaKnown RBP18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 SHC4Q6S5L8 630 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 PHKBQ93100 1093 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 CLIC6Q96NY7 704 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 ADAM21Q9UKJ8 722 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 IKBKBO14920 756 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 CFAP100Q494V2 611 aa18.31■□□□□ 0.52
CHMP1A-201ENST00000397901 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■■□ 22.8
CHMP1A-201ENST00000397901 KRT40Q6A162 431 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 TRDNQ13061 729 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 SENP2Q9HC62 589 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
CHMP1A-201ENST00000397901 TMEM232C9JQI7 657 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 MYL5Q02045 173 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 HSP90AA4PQ58FG1 418 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 MICU3Q86XE3 530 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 TBC1D10CQ8IV04 446 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 BTG4Q9NY30 223 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 TUBE1Q9UJT0 475 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 ZMYM6O95789 1325 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 APPP05067 770 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 GPR161Q8N6U8 529 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 FAM89AQ96GI7 184 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 CCDC34Q96HJ3 373 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 ARFGAP3Q9NP61 516 aa18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-201ENST00000397901 CDC27P30260 824 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 PACS2Q86VP3 889 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 HPSEQ9Y251 543 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 ATP2B1P20020 1258 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 PTPAQ15257 358 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 DEF6Q9H4E7 631 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 COL14A1Q05707 1796 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 ITGB4P16144 1822 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 DISP2A7MBM2 1401 aa18.28■□□□□ 0.52
CHMP1A-201ENST00000397901 UBE2Q2LH0YL09 131 aa18.27■□□□□ 0.52
CHMP1A-201ENST00000397901 FAM177A1Q8N128 213 aaPredicted RBP18.27■□□□□ 0.52
CHMP1A-201ENST00000397901 MYL10Q9BUA6 226 aa18.27■□□□□ 0.52
CHMP1A-201ENST00000397901 CARD6Q9BX69 1037 aa18.27■□□□□ 0.52
CHMP1A-201ENST00000397901 FANCLQ9NW38 375 aa18.27■□□□□ 0.52
CHMP1A-201ENST00000397901 B4E1Z4 1266 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 FANCGO15287 622 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 CBFA2T2O43439 604 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 TOP1P11387 765 aaKnown RBP18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 MCAMP43121 646 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 LONRF3Q496Y0 759 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 OLFM4Q6UX06 510 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 JMYQ8N9B5 988 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 PIGBQ92521 554 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 C4AP0C0L4 1744 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 C4BP0C0L5 1744 aa18.27■□□□□ 0.51
CHMP1A-201ENST00000397901 SH2B2O14492 632 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 PPP6R2O75170 966 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
CHMP1A-201ENST00000397901 URI1O94763 535 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms