RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 GHRHP01286 108 aa8.17□□□□□ -1.1
CEP290-202ENST00000397838 PWP2Q15269 919 aaKnown RBP8.17□□□□□ -1.1
CEP290-202ENST00000397838 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.17□□□□□ -1.1
CEP290-202ENST00000397838 WIPI1Q5MNZ9 446 aaPredicted RBP8.17□□□□□ -1.1
CEP290-202ENST00000397838 PERM1Q5SV97 790 aa8.17□□□□□ -1.1
CEP290-202ENST00000397838 CCDC181Q5TID7 509 aa8.17□□□□□ -1.1
CEP290-202ENST00000397838 C19orf47Q8N9M1 422 aaKnown RBP8.17□□□□□ -1.1
CEP290-202ENST00000397838 ZSCAN1Q8NBB4 408 aa8.17□□□□□ -1.1
CEP290-202ENST00000397838 GTPBP3Q969Y2 492 aaKnown RBP8.17□□□□□ -1.1
CEP290-202ENST00000397838 LGR4Q9BXB1 951 aa8.17□□□□□ -1.1
CEP290-202ENST00000397838 MEIS3P2A8K0S8 358 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 LBRQ14739 615 aaKnown RBP8.16□□□□□ -1.1
CEP290-202ENST00000397838 VHLLQ6RSH7 139 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 UNC5AQ6ZN44 842 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 DDX42Q86XP3 938 aaKnown RBP eCLIP8.16□□□□□ -1.1
CEP290-202ENST00000397838 GPBAR1Q8TDU6 330 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 TMEM40Q8WWA1 233 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 KLHL6Q8WZ60 621 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 ZNF837Q96EG3 531 aaPredicted RBP8.16□□□□□ -1.1
CEP290-202ENST00000397838 PLPPR2Q96GM1 343 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 UBE2OQ9C0C9 1292 aaKnown RBP8.16□□□□□ -1.1
CEP290-202ENST00000397838 FAM86C1Q9NVL1 165 aa8.16□□□□□ -1.1
CEP290-202ENST00000397838 SLC35F4A4IF30 521 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 MAN1A2O60476 641 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 POLR2BP30876 1174 aaKnown RBP8.15□□□□□ -1.1
CEP290-202ENST00000397838 SYT9Q86SS6 491 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 FAM35AQ86V20 835 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 EXOC2Q96KP1 924 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 CLUHP3Q96NS8 147 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 SLC9A7Q96T83 725 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 RAPGEF3O95398 923 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 STAT3P40763 770 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 PCBP4P57723 403 aaKnown RBP8.15□□□□□ -1.1
CEP290-202ENST00000397838 HSP90AB2PQ58FF8 381 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 LRFN4Q6PJG9 635 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 TXNDC11Q6PKC3 985 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 EID1Q9Y6B2 187 aa8.15□□□□□ -1.1
CEP290-202ENST00000397838 SOX1O00570 391 aaPredicted RBP8.14□□□□□ -1.11
CEP290-202ENST00000397838 TBX4P57082 545 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 TM9SF2Q99805 663 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 SPATA9Q9BWV2 254 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 CACNA2D2Q9NY47 1150 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 PCDHA4Q9UN74 947 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 C2CD2LO14523 706 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 PDE8AO60658 829 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 SMNDC1O75940 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
CEP290-202ENST00000397838 CTSBP07858 339 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
CEP290-202ENST00000397838 FGFR3P22607 806 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 PABPC4Q13310 644 aaKnown RBP eCLIP8.14□□□□□ -1.11
CEP290-202ENST00000397838 LRRC14Q15048 493 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 ATG4CQ96DT6 458 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 WDR89Q96FK6 387 aaPredicted RBP8.14□□□□□ -1.11
CEP290-202ENST00000397838 SMG9Q9H0W8 520 aaKnown RBP8.14□□□□□ -1.11
CEP290-202ENST00000397838 TYW1Q9NV66 732 aaKnown RBP8.14□□□□□ -1.11
CEP290-202ENST00000397838 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
CEP290-202ENST00000397838 TPD52L2O43399 206 aaKnown RBP8.13□□□□□ -1.11
CEP290-202ENST00000397838 SUSD5O60279 629 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 TMEM67Q5HYA8 995 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 EEPD1Q7L9B9 569 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 RNF180Q86T96 592 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 NINJ1Q92982 152 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 KIAA1211LQ6NV74 962 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 MFSD3Q96ES6 412 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 PLAAQ9Y263 795 aa8.13□□□□□ -1.11
CEP290-202ENST00000397838 SLC22A31A6NKX4 558 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 AVPP01185 164 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 LRRC41Q15345 812 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 ZBTB38Q8NAP3 1195 aaPredicted RBP8.12□□□□□ -1.11
CEP290-202ENST00000397838 ZSWIM2Q8NEG5 633 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 GDF6Q6KF10 455 aaPredicted RBP8.12□□□□□ -1.11
CEP290-202ENST00000397838 CCDC155Q8N6L0 562 aa8.12□□□□□ -1.11
CEP290-202ENST00000397838 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
CEP290-202ENST00000397838 NME1P15531 152 aaKnown RBP8.11□□□□□ -1.11
CEP290-202ENST00000397838 IKBKEQ14164 716 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 FAM209AQ5JX71 171 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 STRA8Q7Z7C7 330 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 TRIM22Q8IYM9 498 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 NRSN2Q9GZP1 204 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 PLA2G2EQ9NZK7 142 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 KLHL3Q9UH77 587 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 KLF15Q9UIH9 416 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 EXOSC10Q01780 885 aaKnown RBP8.11□□□□□ -1.11
CEP290-202ENST00000397838 TARS2Q9BW92 718 aaKnown RBP8.11□□□□□ -1.11
CEP290-202ENST00000397838 ADAM19Q9H013 955 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 CCDC86Q9H6F5 360 aaKnown RBP8.11□□□□□ -1.11
CEP290-202ENST00000397838 EFCC1Q9HA90 598 aa8.11□□□□□ -1.11
CEP290-202ENST00000397838 PTPRAP18433 802 aa8.1□□□□□ -1.11
CEP290-202ENST00000397838 NLRC3Q7RTR2 1065 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms