RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KIAA0825Q8IV33 1275 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 SH3RF3Q8TEJ3 882 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 TMEM87BQ96K49 555 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 FOCADQ5VW36 1801 aa22.48■■□□□ 1.19
TSPAN4-204ENST00000397404 HAND2P61296 217 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 APOBEC3HQ6NTF7 200 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 STOX1Q6ZVD7 989 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 LAMB1P07942 1786 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 USP17L12C9JPN9 530 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 USP17L21D6R901 530 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 F8W031 263 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 AK2P54819 239 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 FGD1P98174 961 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 MB21D2Q8IYB1 491 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 ESR2Q92731 530 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 DPF2Q92785 391 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 CWC22Q9HCG8 908 aaKnown RBP22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
TSPAN4-204ENST00000397404 ORC4O43929 436 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 USP17L8P0C7I0 530 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 PDIA4P13667 645 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 CXCL9Q07325 125 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 TMTC2Q8N394 836 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 TGFBRAP1Q8WUH2 860 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 IDI2Q9BXS1 227 aa22.46■■□□□ 1.19
TSPAN4-204ENST00000397404 NAV1Q8NEY1 1877 aa22.45■■□□□ 1.19
TSPAN4-204ENST00000397404 COL4A5P29400 1685 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 FLT1P17948 1338 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 DICER1Q9UPY3 1922 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 RAD17O75943 681 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 CD2BP2O95400 341 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 CUL4AQ13619 759 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 CCDC178Q5BJE1 867 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 C12orf60Q5U649 245 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 FKBP1CQ5VVH2 108 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 TMX3Q96JJ7 454 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 DHX36Q9H2U1 1008 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 USP40Q9NVE5 1235 aa22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 COL2A1P02458 1487 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-204ENST00000397404 EVCP57679 992 aa22.44■■□□□ 1.18
TSPAN4-204ENST00000397404 TBC1D10CQ8IV04 446 aa22.44■■□□□ 1.18
TSPAN4-204ENST00000397404 NBPF3Q9H094 633 aa22.44■■□□□ 1.18
TSPAN4-204ENST00000397404 TMOD2Q9NZR1 351 aa22.44■■□□□ 1.18
TSPAN4-204ENST00000397404 TAF6LQ9Y6J9 622 aa22.44■■□□□ 1.18
TSPAN4-204ENST00000397404 POLR3DP05423 398 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 SCNN1DP51172 638 aa22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 RBM5P52756 815 aaKnown RBP eCLIP22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 ARHGAP27Q6ZUM4 889 aa22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 MXD3Q9BW11 206 aa22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 CIZ1Q9ULV3 898 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 DDX60LQ5H9U9 1706 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-204ENST00000397404 CDK5RAP2Q96SN8 1893 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 MYO1BO43795 1136 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 LIFRP42702 1097 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 DLGAP5Q15398 846 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 CFAP100Q494V2 611 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 CDC42EP5Q6NZY7 148 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 ZNF274Q96GC6 653 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 BAZ2AQ9UIF9 1905 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 ECM29Q5VYK3 1845 aa22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 ZC3H4Q9UPT8 1303 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-204ENST00000397404 ERICH2A1L162 156 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 PRC1O43663 620 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 ENTPD3O75355 529 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 WDHD1O75717 1129 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 HLA-DOAP06340 250 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 RCAN1P53805 252 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 Q6ZUG5 572 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 IQCA1Q86XH1 822 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 SPDYE2BA6NHP3 402 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 SOCS7O14512 581 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 SPDYE6P0CI01 402 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 ZNF280AP59817 542 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 RASSF7Q02833 373 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 CTDSPL2Q05D32 466 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 TOB2Q14106 344 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 SWAP70Q9UH65 585 aa22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.41■■□□□ 1.18
TSPAN4-204ENST00000397404 MAPKAPK5Q8IW41 473 aa22.4■■□□□ 1.18
TSPAN4-204ENST00000397404 OSBPL5Q9H0X9 879 aaPredicted RBP22.4■■□□□ 1.18
TSPAN4-204ENST00000397404 EHD4Q9H223 541 aa22.4■■□□□ 1.18
TSPAN4-204ENST00000397404 NEDD4P46934 1319 aa22.39■■□□□ 1.18
TSPAN4-204ENST00000397404 PPP4R3BQ5MIZ7 849 aa22.39■■□□□ 1.17
TSPAN4-204ENST00000397404 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.17
TSPAN4-204ENST00000397404 GPC2Q8N158 579 aa22.39■■□□□ 1.17
TSPAN4-204ENST00000397404 MYH1P12882 1939 aa22.39■■□□□ 1.17
TSPAN4-204ENST00000397404 B4E1Z4 1266 aa22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 DHX16O60231 1041 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 CPA1P15085 419 aa22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 PPP2R5BQ15173 497 aa22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 C16orf86Q6ZW13 317 aa22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 UBAC1Q9BSL1 405 aa22.38■■□□□ 1.17
TSPAN4-204ENST00000397404 TOMM22Q9NS69 142 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms