RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 TSGA10IPQ3SY00 556 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 BEND6Q5SZJ8 279 aaPredicted RBP11.31□□□□□ -0.6
APTX-207ENST00000397172 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 BLOC1S2Q6QNY1 142 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 B4GALNT4Q76KP1 1039 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 LRRN4CLQ8ND94 238 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 PGBD1Q96JS3 809 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 SDF4Q9BRK5 362 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 STK31Q9BXU1 1019 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
APTX-207ENST00000397172 HMG20BQ9P0W2 317 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 RCOR1Q9UKL0 485 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 FAN1Q9Y2M0 1017 aa11.31□□□□□ -0.6
APTX-207ENST00000397172 STX10O60499 249 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 KIAA0754O94854 1291 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 LARGE1O95461 756 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
APTX-207ENST00000397172 ITPK1Q13572 414 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
APTX-207ENST00000397172 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
APTX-207ENST00000397172 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 LLPHQ9BRT6 129 aaKnown RBP11.3□□□□□ -0.6
APTX-207ENST00000397172 PPP2R2CQ9Y2T4 447 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
APTX-207ENST00000397172 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 STARD3NLO95772 234 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 HOXB7P09629 217 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 HNRNPH1P31943 449 aaKnown RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 INPP5BP32019 993 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 SLC4A10Q6U841 1118 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 L1RE1Q9UN81 338 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 C5P01031 1676 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 KIF5CO60282 957 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 NLRP12P59046 1061 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 MAP2K1Q02750 393 aaPredicted RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 RESTQ13127 1097 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 VEZTQ9HBM0 779 aa11.29□□□□□ -0.6
APTX-207ENST00000397172 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
APTX-207ENST00000397172 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
APTX-207ENST00000397172 H0YHG0 523 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 CHUKO15111 745 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 SERPINC1P01008 464 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
APTX-207ENST00000397172 AARSP49588 968 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-207ENST00000397172 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-207ENST00000397172 KCNQ4P56696 695 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 UBASH3AP57075 661 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
APTX-207ENST00000397172 FANCCQ00597 558 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 CASP8Q14790 479 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 TSHZ3Q63HK5 1081 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 FAM204AQ9H8W3 233 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 TJP1Q07157 1748 aa11.28□□□□□ -0.6
APTX-207ENST00000397172 A0A1B0GUA9 196 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 ZKSCAN8Q15776 578 aaPredicted RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 WHAMMP3Q1A5X7 153 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 NECAB1Q8N987 351 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 JMYQ8N9B5 988 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 FSIP1Q8NA03 581 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 CCDC12Q8WUD4 166 aaPredicted RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 NAA15Q9BXJ9 866 aaKnown RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 KIAA1468Q9P260 1216 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 COL5A3P25940 1745 aaPredicted RBP11.27□□□□□ -0.61
APTX-207ENST00000397172 PXDNLA1KZ92 1463 aa11.27□□□□□ -0.61
APTX-207ENST00000397172 CTAGE15A4D2H0 777 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 VWA3AA6NCI4 1184 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 CUTAO60888 179 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 WDHD1O75717 1129 aaPredicted RBP11.26□□□□□ -0.61
APTX-207ENST00000397172 CCDC175P0C221 793 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 PRR29P0C7W0 189 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 CTAGE8P0CG41 777 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 ELF1P32519 619 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 CRKLP46109 303 aaKnown RBP11.26□□□□□ -0.61
APTX-207ENST00000397172 CRYMQ14894 314 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 CTAGE6Q86UF2 777 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
APTX-207ENST00000397172 CTAGE4Q8IX94 777 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms