RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CASP7P55210 303 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 ANTXR2P58335 489 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 FOXO4P98177 505 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 KRT40Q6A162 431 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 LEKR1Q6ZMV7 388 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
CAPN3-206ENST00000397163 DHX58Q96C10 678 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 KCNH3Q9ULD8 1083 aa10.49□□□□□ -0.73
CAPN3-206ENST00000397163 EYA2O00167 538 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 STX10O60499 249 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 RGPD2P0DJD1 1756 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 GUCY2CP25092 1073 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PDE4BQ07343 736 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 TRDNQ13061 729 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
CAPN3-206ENST00000397163 USP54Q70EL1 1684 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 LRP10Q7Z4F1 713 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 METAP2P50579 478 aaKnown RBP eCLIP10.48□□□□□ -0.73
CAPN3-206ENST00000397163 TRIM29Q14134 588 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 SPECC1Q5M775 1068 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 RESP18Q5W5W9 173 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 SPECC1LQ69YQ0 1117 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 RSRC2Q7L4I2 434 aaKnown RBP10.48□□□□□ -0.73
CAPN3-206ENST00000397163 TICAM2Q86XR7 235 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 FOXP4Q8IVH2 680 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 NCAPGQ9BPX3 1015 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 NFE2L3Q9Y4A8 694 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 CDC27P30260 824 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 ACTN2P35609 894 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PTPAQ15257 358 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 LONRF2Q1L5Z9 754 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PHKBQ93100 1093 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 FUT8Q9BYC5 575 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 SUGCTQ9HAC7 445 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PDE11AQ9HCR9 933 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 CEP126Q9P2H0 1117 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 HOOK1Q9UJC3 728 aaKnown RBP10.48□□□□□ -0.73
CAPN3-206ENST00000397163 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
CAPN3-206ENST00000397163 PLEKHG2Q9H7P9 1386 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 EIF3CLB5ME19 914 aaKnown RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 FOXN1O15353 648 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 CUTAO60888 179 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 CDKL5O76039 1030 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 TXLNAP40222 546 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 JAKMIP3Q5VZ66 844 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 KIFC2Q96AC6 838 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 EIF3CQ99613 913 aaKnown RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 TOM1O60784 492 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 TBX2Q13207 712 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 MICU3Q86XE3 530 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 PUS3Q9BZE2 481 aaKnown RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 CWC25Q9NXE8 425 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-206ENST00000397163 KCNG1Q9UIX4 513 aa10.47□□□□□ -0.73
CAPN3-206ENST00000397163 H7C1W4 665 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 FOXP2O15409 715 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 BMP6P22004 513 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 FAM212AQ96EL1 285 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 IRX2Q9BZI1 471 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 LZTFL1Q9NQ48 299 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 PUF60Q9UHX1 559 aaKnown RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 ZMYM6O95789 1325 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 CCDC151A5D8V7 595 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 PHKG2P15735 406 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 CHMP4BP1P59074 171 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 ZC3H6P61129 1189 aaKnown RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 ZNF827Q17R98 1081 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 APPBP2Q92624 585 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 EXOC4Q96A65 974 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 PUS7LQ9H0K6 701 aaKnown RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 MAN1B1Q9UKM7 699 aa10.46□□□□□ -0.73
CAPN3-206ENST00000397163 ANGEL1Q9UNK9 670 aaKnown RBP10.46□□□□□ -0.73
CAPN3-206ENST00000397163 GPAA1O43292 621 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 CCDC175P0C221 793 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 ADORA1P30542 326 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 FMR1Q06787 632 aaKnown RBP eCLIP10.46□□□□□ -0.74
CAPN3-206ENST00000397163 MTF1Q14872 753 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 BRD3Q15059 726 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 NOM1Q5C9Z4 860 aaKnown RBP10.46□□□□□ -0.74
CAPN3-206ENST00000397163 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 MAP3K14Q99558 947 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 DEF6Q9H4E7 631 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 MRPL44Q9H9J2 332 aaKnown RBP10.46□□□□□ -0.74
CAPN3-206ENST00000397163 RAI14Q9P0K7 980 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 DACH1Q9UI36 760 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 DENND2AQ9ULE3 1009 aa10.46□□□□□ -0.74
CAPN3-206ENST00000397163 FAM237AA0A1B0GTK4 181 aa10.45□□□□□ -0.74
CAPN3-206ENST00000397163 IARSP41252 1262 aaKnown RBP10.45□□□□□ -0.74
CAPN3-206ENST00000397163 POSTNQ15063 836 aa10.45□□□□□ -0.74
CAPN3-206ENST00000397163 STK11IPQ8N1F8 1099 aa10.45□□□□□ -0.74
CAPN3-206ENST00000397163 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
CAPN3-206ENST00000397163 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms