RNA–Protein interactions for RNA: ENST00000397138.5

SNAP23-203, Transcript of synaptosome associated protein 23, humanhuman

TSL 1 (best) BASIC

Gene SNAP23, Length 477 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-203ENST00000397138 ARHGAP27Q6ZUM4 889 aa4.95□□□□□ -1.62
SNAP23-203ENST00000397138 SMYD4Q8IYR2 804 aaPredicted RBP4.95□□□□□ -1.62
SNAP23-203ENST00000397138 TOP6BLQ8N6T0 577 aa4.95□□□□□ -1.62
SNAP23-203ENST00000397138 SYNGAP1Q96PV0 1343 aa4.95□□□□□ -1.62
SNAP23-203ENST00000397138 HCLS1P14317 486 aaPredicted RBP4.94□□□□□ -1.62
SNAP23-203ENST00000397138 MPSTP25325 297 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 EIF1AXP47813 144 aaKnown RBP4.94□□□□□ -1.62
SNAP23-203ENST00000397138 NKPD1Q17RQ9 610 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 HP1BP3Q5SSJ5 553 aaPredicted RBP4.94□□□□□ -1.62
SNAP23-203ENST00000397138 GGNQ86UU5 652 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 SNX29Q8TEQ0 813 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 ZC3H12CQ9C0D7 883 aaKnown RBP4.94□□□□□ -1.62
SNAP23-203ENST00000397138 ZFYVE28Q9HCC9 887 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 AMOTL2Q9Y2J4 779 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 SNX11Q9Y5W9 270 aa4.94□□□□□ -1.62
SNAP23-203ENST00000397138 ETV2O00321 342 aaPredicted RBP4.93□□□□□ -1.62
SNAP23-203ENST00000397138 FOXD2O60548 495 aaPredicted RBP4.93□□□□□ -1.62
SNAP23-203ENST00000397138 MED14OSP0DP75 135 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 SRPK2P78362 688 aaKnown RBP4.93□□□□□ -1.62
SNAP23-203ENST00000397138 NOM1Q5C9Z4 860 aaKnown RBP4.93□□□□□ -1.62
SNAP23-203ENST00000397138 TMEM67Q5HYA8 995 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 ASB11Q8WXH4 323 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 CSRNP1Q96S65 589 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 ZNF576Q9H609 170 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 LIN7BQ9HAP6 207 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 PIDD1Q9HB75 910 aa4.93□□□□□ -1.62
SNAP23-203ENST00000397138 SMG5Q9UPR3 1016 aaKnown RBP4.93□□□□□ -1.62
SNAP23-203ENST00000397138 RNGTTO60942 597 aaKnown RBP4.92□□□□□ -1.62
SNAP23-203ENST00000397138 TMEM253P0C7T8 217 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 PCSK2P16519 638 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 ID3Q02535 119 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 TPRNQ4KMQ1 711 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 CIAPIN1Q6FI81 312 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 CYFIP1Q7L576 1253 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 HELQQ8TDG4 1101 aa4.92□□□□□ -1.62
SNAP23-203ENST00000397138 CLP1Q92989 425 aaKnown RBP4.92□□□□□ -1.62
SNAP23-203ENST00000397138 EIF4EBP3O60516 100 aaPredicted RBP4.91□□□□□ -1.62
SNAP23-203ENST00000397138 LINC00310P59036 64 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 NFKB2Q00653 900 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 MTMR3Q13615 1198 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 ISL2Q96A47 359 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 CARS2Q9HA77 564 aaKnown RBP4.91□□□□□ -1.62
SNAP23-203ENST00000397138 ZFYVE1Q9HBF4 777 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 PARD6AQ9NPB6 346 aa4.91□□□□□ -1.62
SNAP23-203ENST00000397138 NUAK1O60285 661 aa4.9□□□□□ -1.63
SNAP23-203ENST00000397138 KIF4BQ2VIQ3 1234 aa4.9□□□□□ -1.63
SNAP23-203ENST00000397138 IRF2BPLQ9H1B7 796 aa4.9□□□□□ -1.63
SNAP23-203ENST00000397138 PCOLCE2Q9UKZ9 415 aa4.9□□□□□ -1.63
SNAP23-203ENST00000397138 TCAF2A6NFQ2 919 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 ZNF157P51786 506 aaPredicted RBP4.89□□□□□ -1.63
SNAP23-203ENST00000397138 FAAP100Q0VG06 881 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 USPL1Q5W0Q7 1092 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 UBE3DQ7Z6J8 389 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 GALNT12Q8IXK2 581 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 TTC16Q8NEE8 873 aa4.89□□□□□ -1.63
SNAP23-203ENST00000397138 DCP1AQ9NPI6 582 aaPredicted RBP4.89□□□□□ -1.63
SNAP23-203ENST00000397138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.88□□□□□ -1.63
SNAP23-203ENST00000397138 FZD6O60353 706 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 BMP7P18075 431 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 GLDCP23378 1020 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 ITPKAP23677 461 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 GDNFP39905 211 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 SEMA3GQ9NS98 782 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 CNTNAP4Q9C0A0 1308 aa4.88□□□□□ -1.63
SNAP23-203ENST00000397138 ATP2B4P23634 1241 aa4.87□□□□□ -1.63
SNAP23-203ENST00000397138 SKOR2Q2VWA4 1001 aaPredicted RBP4.87□□□□□ -1.63
SNAP23-203ENST00000397138 DBX2Q6ZNG2 339 aa4.87□□□□□ -1.63
SNAP23-203ENST00000397138 KCNC2Q96PR1 638 aa4.87□□□□□ -1.63
SNAP23-203ENST00000397138 EPB41L4BQ9H329 900 aa4.87□□□□□ -1.63
SNAP23-203ENST00000397138 ATP13A1Q9HD20 1204 aa4.87□□□□□ -1.63
SNAP23-203ENST00000397138 PRR33A8MZF0 331 aa4.86□□□□□ -1.63
SNAP23-203ENST00000397138 IGF2BP3O00425 579 aaKnown RBP eCLIP4.86□□□□□ -1.63
SNAP23-203ENST00000397138 ERVFC1P60507 584 aa4.86□□□□□ -1.63
SNAP23-203ENST00000397138 AP3B2Q13367 1082 aa4.86□□□□□ -1.63
SNAP23-203ENST00000397138 GJD3Q8N144 294 aa4.86□□□□□ -1.63
SNAP23-203ENST00000397138 CCDC87Q9NVE4 849 aa4.86□□□□□ -1.63
SNAP23-203ENST00000397138 ATG7O95352 703 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 EOMESO95936 686 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 SLFN14P0C7P3 912 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNAP23-203ENST00000397138 STK35Q8TDR2 534 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 GTF3C2Q8WUA4 911 aaPredicted RBP4.85□□□□□ -1.63
SNAP23-203ENST00000397138 KCNN1Q92952 543 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 HSPA12BQ96MM6 686 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 ZCCHC4Q9H5U6 513 aa4.85□□□□□ -1.63
SNAP23-203ENST00000397138 GSTP1P09211 210 aaKnown RBP4.84□□□□□ -1.63
SNAP23-203ENST00000397138 NTF4P34130 210 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 CLCN7P51798 805 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 KIAA0319Q5VV43 1072 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 PDZD3Q86UT5 571 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 DDX54Q8TDD1 881 aaKnown RBP4.84□□□□□ -1.63
SNAP23-203ENST00000397138 ABCB6Q9NP58 842 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 PRDM10Q9NQV6 1147 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 GTF2IRD1Q9UHL9 959 aa4.84□□□□□ -1.63
SNAP23-203ENST00000397138 ZNF777Q9ULD5 760 aaPredicted RBP4.84□□□□□ -1.63
SNAP23-203ENST00000397138 TRIM13O60858 407 aa4.83□□□□□ -1.64
SNAP23-203ENST00000397138 NPR3P17342 541 aa4.83□□□□□ -1.64
SNAP23-203ENST00000397138 SYN1P17600 705 aa4.83□□□□□ -1.64
SNAP23-203ENST00000397138 KRTAP1-1Q07627 177 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms