RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 MICALL2Q8IY33 904 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 KCNB2Q92953 911 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 MYOZ2Q9NPC6 264 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 MKRN1Q9UHC7 482 aaKnown RBP17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 CNOT7Q9UIV1 285 aaKnown RBP17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 SCN4AP35499 1836 aa17.61■□□□□ 0.41
TM9SF1-202ENST00000396854 APPP05067 770 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 DLGAP5Q15398 846 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 PRMT6Q96LA8 375 aaPredicted RBP17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 DCP1AQ9NPI6 582 aaPredicted RBP17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 GPRC5DQ9NZD1 345 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 WDR90Q96KV7 1748 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 SHTN1A0MZ66 631 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 DDNO94850 711 aaPredicted RBP17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 NAPBQ9H115 298 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
TM9SF1-202ENST00000396854 ANAPC15P60006 121 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 CREB3L3Q68CJ9 461 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 SLC27A2O14975 620 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 WDHD1O75717 1129 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 USP5P45974 858 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 RNF20Q5VTR2 975 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 TGFBRAP1Q8WUH2 860 aa17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-202ENST00000396854 FLT1P17948 1338 aa17.58■□□□□ 0.41
TM9SF1-202ENST00000396854 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
TM9SF1-202ENST00000396854 TDO2P48775 406 aa17.58■□□□□ 0.4
TM9SF1-202ENST00000396854 IDI2Q9BXS1 227 aa17.58■□□□□ 0.4
TM9SF1-202ENST00000396854 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
TM9SF1-202ENST00000396854 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 H7C1D1 291 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 WNT10BO00744 389 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 CYP21A2P08686 494 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 TSGA10IPQ3SY00 556 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 TDRD3Q9H7E2 651 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 ARPP21Q9UBL0 812 aaPredicted RBP17.57■□□□□ 0.4
TM9SF1-202ENST00000396854 EGFRP00533 1210 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 KIF4BQ2VIQ3 1234 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 SBK1Q52WX2 424 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 MAPKAPK5Q8IW41 473 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 RASEFQ8IZ41 740 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 SNX14Q9Y5W7 946 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 MYO1BO43795 1136 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 ZKSCAN1P17029 563 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 LMOD1P29536 600 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 PANK2Q9BZ23 570 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 ZNF70Q9UC06 446 aaPredicted RBP17.56■□□□□ 0.4
TM9SF1-202ENST00000396854 SIPA1L1O43166 1804 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 ZNF213O14771 459 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 NFIAQ12857 509 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 NBPF9Q3BBW0 867 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 FKBP1CQ5VVH2 108 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 CTR9Q6PD62 1173 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 TMOD2Q9NZR1 351 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 ANAPC4Q9UJX5 808 aa17.55■□□□□ 0.4
TM9SF1-202ENST00000396854 EPS15P42566 896 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 MYH8P13535 1937 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 USP17L21D6R901 530 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 PPARAQ07869 468 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 PICALMQ13492 652 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 NBPF3Q9H094 633 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
TM9SF1-202ENST00000396854 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 ENTPD3O75355 529 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 CACNB3P54284 484 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 HAND2P61296 217 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 KRT32Q14532 448 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 C12orf60Q5U649 245 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 ATRNL1Q5VV63 1379 aa17.53■□□□□ 0.4
TM9SF1-202ENST00000396854 CLRN2A0PK11 232 aa17.52■□□□□ 0.4
TM9SF1-202ENST00000396854 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
TM9SF1-202ENST00000396854 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
TM9SF1-202ENST00000396854 AMOTL1Q8IY63 956 aa17.52■□□□□ 0.4
TM9SF1-202ENST00000396854 RRAGDQ9NQL2 400 aaPredicted RBP17.52■□□□□ 0.4
TM9SF1-202ENST00000396854 NUCB2P80303 420 aa17.52■□□□□ 0.39
TM9SF1-202ENST00000396854 CYP2D7A0A087X1C5 515 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 MINDY4BA8MYZ0 360 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 ST18O60284 1047 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
TM9SF1-202ENST00000396854 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms