RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 BRAPQ7Z569 592 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 CCDC82Q8N4S0 544 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 ZFP91Q96JP5 570 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 GOLGA6L9A6NEM1 432 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 CYB5R4Q7L1T6 521 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 PROSER2Q86WR7 435 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 KIFC2Q96AC6 838 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 DHX58Q96C10 678 aa27.49■■□□□ 1.99
CSNK1E-203ENST00000396832 TBC1D10CQ8IV04 446 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 NOP2P46087 812 aaKnown RBP27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 METAP2P50579 478 aaKnown RBP eCLIP27.48■■□□□ 1.992e-6■■■■□ 20.9
CSNK1E-203ENST00000396832 KRT40Q6A162 431 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 TOGARAM2Q6ZUX3 1019 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 TRMT44Q8IYL2 757 aaKnown RBP27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 CCDC151A5D8V7 595 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 B4E1Z4 1266 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 PDE4BQ07343 736 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 LONRF3Q496Y0 759 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 JAKMIP3Q5VZ66 844 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 NBPF3Q9H094 633 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 TUBE1Q9UJT0 475 aa27.48■■□□□ 1.99
CSNK1E-203ENST00000396832 MAP2K7O14733 419 aa27.47■■□□□ 1.99
CSNK1E-203ENST00000396832 ATP2B1P20020 1258 aa27.47■■□□□ 1.99
CSNK1E-203ENST00000396832 ZSWIM4Q9H7M6 989 aa27.47■■□□□ 1.99
CSNK1E-203ENST00000396832 SLC39A14Q15043 492 aa27.47■■□□□ 1.99
CSNK1E-203ENST00000396832 CHMP4CQ96CF2 233 aa27.47■■□□□ 1.99
CSNK1E-203ENST00000396832 GRAMD1CQ8IYS0 662 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 IQUBQ8NA54 791 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 ADAMTS7Q9UKP4 1686 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 IDH1O75874 414 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 ADKP55263 362 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 NFXL1Q6ZNB6 911 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 METTL16Q86W50 562 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 FOXP4Q8IVH2 680 aaPredicted RBP27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 INTS13Q9NVM9 706 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 VPS18Q9P253 973 aa27.46■■□□□ 1.99
CSNK1E-203ENST00000396832 BRD3Q15059 726 aa27.45■■□□□ 1.99
CSNK1E-203ENST00000396832 IRX3P78415 501 aaPredicted RBP27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 GRIN1Q05586 938 aa27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 MCM6Q14566 821 aa27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 LEKR1Q6ZMV7 388 aa27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 DESI2Q9BSY9 194 aa27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 PDE11AQ9HCR9 933 aa27.45■■□□□ 1.98
CSNK1E-203ENST00000396832 TRDNQ13061 729 aa27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 CNNM3Q8NE01 707 aa27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 PCDHA5Q9Y5H7 936 aa27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 STX10O60499 249 aa27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 CMTR1Q8N1G2 835 aaKnown RBP27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 CCDC12Q8WUD4 166 aaPredicted RBP27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 APPBP2Q92624 585 aa27.44■■□□□ 1.98
CSNK1E-203ENST00000396832 OLFM4Q6UX06 510 aa27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 GPR108Q9NPR9 543 aa27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 KARSQ15046 597 aaKnown RBP27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 SLC9C2Q5TAH2 1124 aa27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 CAMTA1Q9Y6Y1 1673 aa27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 BMP6P22004 513 aa27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 TBX2Q13207 712 aaPredicted RBP27.43■■□□□ 1.98
CSNK1E-203ENST00000396832 MCAMP43121 646 aa27.42■■□□□ 1.98
CSNK1E-203ENST00000396832 TC2NQ8N9U0 490 aa27.42■■□□□ 1.98
CSNK1E-203ENST00000396832 ANGEL1Q9UNK9 670 aaKnown RBP27.42■■□□□ 1.98
CSNK1E-203ENST00000396832 CHMP4BP1P59074 171 aa27.41■■□□□ 1.98
CSNK1E-203ENST00000396832 SLC26A6Q9BXS9 759 aa27.41■■□□□ 1.98
CSNK1E-203ENST00000396832 ADAMTSL3P82987 1691 aa27.41■■□□□ 1.98
CSNK1E-203ENST00000396832 GPTP24298 496 aa27.41■■□□□ 1.98
CSNK1E-203ENST00000396832 IRX2Q9BZI1 471 aaPredicted RBP27.41■■□□□ 1.98
CSNK1E-203ENST00000396832 RANBP6O60518 1105 aaKnown RBP27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 IVLP07476 585 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 PTPAQ15257 358 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 BEND6Q5SZJ8 279 aaPredicted RBP27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 KCNJ14Q9UNX9 436 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 PRR29P0C7W0 189 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 APOA5Q6Q788 366 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 ZKSCAN3Q9BRR0 538 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 KCNH3Q9ULD8 1083 aa27.4■■□□□ 1.98
CSNK1E-203ENST00000396832 MYO1BO43795 1136 aa27.39■■□□□ 1.98
CSNK1E-203ENST00000396832 METTL24Q5JXM2 366 aa27.39■■□□□ 1.98
CSNK1E-203ENST00000396832 HDXQ7Z353 690 aa27.39■■□□□ 1.98
CSNK1E-203ENST00000396832 ZMYM6O95789 1325 aa27.39■■□□□ 1.98
CSNK1E-203ENST00000396832 HNRNPLLQ8WVV9 542 aaKnown RBP27.39■■□□□ 1.97
CSNK1E-203ENST00000396832 C19orf44Q9H6X5 657 aa27.39■■□□□ 1.97
CSNK1E-203ENST00000396832 ANKZF1Q9H8Y5 726 aa27.39■■□□□ 1.97
CSNK1E-203ENST00000396832 PUF60Q9UHX1 559 aaKnown RBP27.39■■□□□ 1.97
CSNK1E-203ENST00000396832 GUCY1A2P33402 732 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 FMR1Q06787 632 aaKnown RBP eCLIP27.38■■□□□ 1.973e-11■■■■■ 66.2
CSNK1E-203ENST00000396832 SRGAP1Q7Z6B7 1085 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 GOLGA6L1Q8N7Z2 621 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 TOMM22Q9NS69 142 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 HPSEQ9Y251 543 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 N4BP1O75113 896 aaKnown RBP27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 RRP12Q5JTH9 1297 aaKnown RBP27.38■■□□□ 1.97
CSNK1E-203ENST00000396832 GOLGA8AA7E2F4 631 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 CUTAO60888 179 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 CTDSPL2Q05D32 466 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 MTF1Q14872 753 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 SPECC1LQ69YQ0 1117 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 CTR9Q6PD62 1173 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 FOXR1Q6PIV2 292 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 MAP3K14Q99558 947 aa27.37■■□□□ 1.97
CSNK1E-203ENST00000396832 MRPL44Q9H9J2 332 aaKnown RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms