RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MECOMQ03112 1051 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 SYNE3Q6ZMZ3 975 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 BRAPQ7Z569 592 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 PDLIM2Q96JY6 352 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 ANKIB1Q9P2G1 1089 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 STK36Q9NRP7 1315 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 CDC27P30260 824 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 WTAPQ15007 396 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 USP28Q96RU2 1077 aa17.44■□□□□ 0.38
CBX3-202ENST00000396386 MYH2Q9UKX2 1941 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 TRIM37O94972 964 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
CBX3-202ENST00000396386 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
CBX3-202ENST00000396386 UVSSAQ2YD98 709 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 SPTY2D1Q68D10 685 aaPredicted RBP17.43■□□□□ 0.38
CBX3-202ENST00000396386 ESR2Q92731 530 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 ALG1Q9BT22 464 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 NAV1Q8NEY1 1877 aa17.43■□□□□ 0.38
CBX3-202ENST00000396386 IGSF3O75054 1194 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 SERPINB2P05120 415 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 CRY2Q49AN0 593 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 OTUD7BQ6GQQ9 843 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 TXNRD3Q86VQ6 643 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 UBAC1Q9BSL1 405 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 MYL10Q9BUA6 226 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 CRNKL1Q9BZJ0 848 aaKnown RBP17.42■□□□□ 0.38
CBX3-202ENST00000396386 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
CBX3-202ENST00000396386 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 MYH6P13533 1939 aa17.42■□□□□ 0.38
CBX3-202ENST00000396386 CCDC192P0DO97 292 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 PRDX5P30044 214 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 RCAN1P53805 252 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 ZNF804AQ7Z570 1209 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 STK11IPQ8N1F8 1099 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 TMTC2Q8N394 836 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 KIF23Q02241 960 aaPredicted RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 NTRK3Q16288 839 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 ZKSCAN3Q9BRR0 538 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 RRAGDQ9NQL2 400 aaPredicted RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 FAM217BQ9NTX9 383 aaPredicted RBP17.41■□□□□ 0.38
CBX3-202ENST00000396386 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 NRXN2Q9P2S2 1712 aa17.41■□□□□ 0.38
CBX3-202ENST00000396386 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
CBX3-202ENST00000396386 WDR66Q8TBY9 1149 aa17.4■□□□□ 0.38
CBX3-202ENST00000396386 PHKBQ93100 1093 aa17.4■□□□□ 0.38
CBX3-202ENST00000396386 RANBP6O60518 1105 aaKnown RBP17.39■□□□□ 0.38
CBX3-202ENST00000396386 NR1I2O75469 434 aa17.39■□□□□ 0.38
CBX3-202ENST00000396386 FMNL1O95466 1100 aaPredicted RBP17.39■□□□□ 0.38
CBX3-202ENST00000396386 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.38
CBX3-202ENST00000396386 RTN1Q16799 776 aa17.39■□□□□ 0.38
CBX3-202ENST00000396386 WASF1Q92558 559 aa17.39■□□□□ 0.38
CBX3-202ENST00000396386 AATFQ9NY61 560 aaKnown RBP eCLIP17.39■□□□□ 0.38
CBX3-202ENST00000396386 IFNAR1P17181 557 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 TRIM29Q14134 588 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 CCDC73Q6ZRK6 1079 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 RBM43Q6ZSC3 357 aaKnown RBP17.39■□□□□ 0.37
CBX3-202ENST00000396386 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 ZNF654Q8IZM8 581 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 TDRD7Q8NHU6 1098 aaKnown RBP17.39■□□□□ 0.37
CBX3-202ENST00000396386 ATP8A2Q9NTI2 1148 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 POLR3EQ9NVU0 708 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 ARPP21Q9UBL0 812 aaPredicted RBP17.39■□□□□ 0.37
CBX3-202ENST00000396386 TNKSO95271 1327 aa17.39■□□□□ 0.37
CBX3-202ENST00000396386 CDK5RAP2Q96SN8 1893 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 CCDC196A0A1B0GTZ2 297 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 ESPNB1AK53 854 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 KIF28PB7ZC32 967 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 YEATS4O95619 227 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 ME1P48163 572 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 GPSM2P81274 684 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 DDR1Q08345 913 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 CAMK4Q16566 473 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 TXNRD1Q16881 649 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 KRT40Q6A162 431 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
CBX3-202ENST00000396386 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 GJB4Q9NTQ9 266 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
CBX3-202ENST00000396386 CYP2D7A0A087X1C5 515 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 POLR3DP05423 398 aaPredicted RBP17.37■□□□□ 0.37
CBX3-202ENST00000396386 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
CBX3-202ENST00000396386 FGRP09769 529 aa17.37■□□□□ 0.37
CBX3-202ENST00000396386 ATP2B4P23634 1241 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms