RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ATG3Q9NT62 314 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 POLE2P56282 527 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 GSDMDP57764 484 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 TEFQ10587 303 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 SSH3Q8TE77 659 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 SIL1Q9H173 461 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 POLD4Q9HCU8 107 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 BCS1LQ9Y276 419 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
NDE1-202ENST00000396355 MAP9Q49MG5 647 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 PI4K2BQ8TCG2 481 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 IFNKQ9P0W0 207 aa9.57□□□□□ -0.88
NDE1-202ENST00000396355 KIF5CO60282 957 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 SYCP1Q15431 976 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 LRRC8AQ8IWT6 810 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 NBPF3Q9H094 633 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 USH1CQ9Y6N9 552 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
NDE1-202ENST00000396355 ZSCAN22P10073 491 aaPredicted RBP9.56□□□□□ -0.88
NDE1-202ENST00000396355 GNGT1P63211 74 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 PPP1R42Q7Z4L9 355 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 CEP89Q96ST8 783 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 FAM167BQ9BTA0 163 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 GOLGA6CA6NDK9 693 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 MYO1FO00160 1098 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 PFDN1O60925 122 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 UBTFL1P0CB47 393 aaPredicted RBP9.56□□□□□ -0.88
NDE1-202ENST00000396355 GOLGA6DP0CG33 693 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 EIF4A1P60842 406 aaKnown RBP9.56□□□□□ -0.88
NDE1-202ENST00000396355 SCRN1Q12765 414 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 NECAB1Q8N987 351 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 PARD6BQ9BYG5 372 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 GOLGA6AQ9NYA3 693 aa9.56□□□□□ -0.88
NDE1-202ENST00000396355 DYTNA2CJ06 578 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 CHUKO15111 745 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 AIMP1Q12904 312 aaKnown RBP9.55□□□□□ -0.88
NDE1-202ENST00000396355 POLA2Q14181 598 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 CPLX2Q6PUV4 134 aaKnown RBP9.55□□□□□ -0.88
NDE1-202ENST00000396355 ADCY9O60503 1353 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 PCK1P35558 622 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 CUL4AQ13619 759 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 CAPZA3Q96KX2 299 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 PCMTD1Q96MG8 357 aaPredicted RBP9.55□□□□□ -0.88
NDE1-202ENST00000396355 INCENPQ9NQS7 918 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 KIF5BP33176 963 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 CHMP4BP1P59074 171 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 IFT88Q13099 833 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 IL17RAQ96F46 866 aa9.55□□□□□ -0.88
NDE1-202ENST00000396355 ECEL1O95672 775 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CLTAP09496 248 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 ZKSCAN1P17029 563 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 ERCC3P19447 782 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 GJB2P29033 226 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 TRDNQ13061 729 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 RNF168Q8IYW5 571 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 PROM2Q8N271 834 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 ORC3Q9UBD5 711 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 KIF1AQ12756 1690 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CTAGE15A4D2H0 777 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 BRD1O95696 1058 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CTAGE8P0CG41 777 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 HPDP32754 393 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 RWDD2BP57060 319 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 MXRA7P84157 204 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 GUCY1B3Q02153 619 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 LRRFIP1Q32MZ4 808 aaKnown RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 BEND3Q5T5X7 828 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CTAGE6Q86UF2 777 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CTAGE4Q8IX94 777 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 SIPA1L3O60292 1781 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 PRAMEF22A3QJZ6 481 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 PI4KAP2A4QPH2 592 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CDC25CP30307 473 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 WHAMMP3Q1A5X7 153 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 SLC27A3Q5K4L6 730 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 CCDC148Q8NFR7 591 aa9.54□□□□□ -0.88
NDE1-202ENST00000396355 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 ABTB1Q969K4 478 aaPredicted RBP9.54□□□□□ -0.88
NDE1-202ENST00000396355 N4BP1O75113 896 aaKnown RBP9.53□□□□□ -0.88
NDE1-202ENST00000396355 ZMYND10O75800 440 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 CORO7P57737 925 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 GOLGA8FQ08AF8 430 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 GOLGA8DPQ0D2H9 430 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 SNCBQ16143 134 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 FAM114A1Q8IWE2 563 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 TCEANC2Q96MN5 208 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 ANO10Q9NW15 660 aa9.53□□□□□ -0.88
NDE1-202ENST00000396355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms