RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 PROSER3Q2NL68 480 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SYCE3A1L190 88 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 IFNAR1P17181 557 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 TSHZ3Q63HK5 1081 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PPFIBP1Q86W92 1011 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 IFNL3Q8IZI9 196 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 KRI1Q8N9T8 703 aaKnown RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 TRIML1Q8N9V2 468 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 EHBP1Q8NDI1 1231 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 RRP36Q96EU6 259 aaKnown RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PSMA7O14818 248 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 GRAPQ13588 217 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 GRAPLQ8TC17 118 aaPredicted RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF622Q969S3 477 aaKnown RBP eCLIP3.87□□□□□ -1.792e-6■■□□□ 14.2
VPS13C-203ENST00000395896 BRIP1Q9BX63 1249 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SERPINB13Q9UIV8 391 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SNX14Q9Y5W7 946 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 DKC1O60832 514 aaKnown RBP eCLIP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ABCD1P33897 745 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SEPT12Q8IYM1 358 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 FBXL16Q8N461 479 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 POLR3EQ9NVU0 708 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PRRC2BQ5JSZ5 2229 aaKnown RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PXDNQ92626 1479 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PTPDC1A2A3K4 754 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 DDAH1O94760 285 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 HCLS1P14317 486 aaPredicted RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 AK8Q96MA6 479 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PNPLA7Q6ZV29 1317 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 PFKFB2O60825 505 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 MBD4O95243 580 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 DTHD1Q6ZMT9 781 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
VPS13C-203ENST00000395896 FOXP1Q9H334 677 aaPredicted RBP3.87□□□□□ -1.79
VPS13C-203ENST00000395896 ADD2P35612 726 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FOXD4L5Q5VV16 416 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 USPL1Q5W0Q7 1092 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 PDCL2Q8N4E4 241 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FOXD4L4Q8WXT5 416 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 DDX11Q96FC9 970 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 MEGF6O75095 1541 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 MYH9P35579 1960 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 TPRNQ4KMQ1 711 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC125Q86Z20 511 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 TEX11Q8IYF3 940 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 RTKN2Q8IZC4 609 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 COA1Q9GZY4 146 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 BICDL2A1A5D9 508 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CHRNDQ07001 517 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 TNNQ9UQP3 1299 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 KDM3BQ7LBC6 1761 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FERMT3Q86UX7 667 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF34Q8IZ26 560 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 NT5C3AQ9H0P0 336 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ACBD3Q9H3P7 528 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ATP2B2Q01814 1243 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 PDIA6Q15084 440 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CFAP100Q494V2 611 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 DCAF15Q66K64 600 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CCDC84Q86UT8 332 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FDX1P10109 184 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 WWC2Q6AWC2 1192 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 REXO1Q8N1G1 1221 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FAM227BQ96M60 508 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 LSG1Q9H089 658 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 NBPF26B4DH59 902 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 NBPF10Q6P3W6 841 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 NBPF15Q8N660 670 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ERCC4Q92889 916 aaPredicted RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CAMTA1Q9Y6Y1 1673 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 LAMB4A4D0S4 1761 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 UFL1O94874 794 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 GCFC2P16383 781 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 SLC26A6Q9BXS9 759 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 APBA3O96018 575 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CYP21A2P08686 494 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 DESP17661 470 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 SLC10A5Q5PT55 438 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 FKBP15Q5T1M5 1219 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 RCSD1Q6JBY9 416 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CRAMP1Q96RY5 1269 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 A0A1W2PQ27 194 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 A0A1W2PQ64 194 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 A0A1W2PQD8 194 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 MCM3P25205 808 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ZNF76P36508 570 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 SLC1A4P43007 532 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CCT2P78371 535 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CERKQ8TCT0 537 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 MAP3K14Q99558 947 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 CUEDC2Q9H467 287 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 SEC24BO95487 1268 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 KRT2P35908 639 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 MLKLQ8NB16 471 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 STK36Q9NRP7 1315 aa3.86□□□□□ -1.79
VPS13C-203ENST00000395896 ARL6IP4Q66PJ3 421 aaKnown RBP3.86□□□□□ -1.79
VPS13C-203ENST00000395896 RIPOR2Q9Y4F9 1068 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms