RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 RBSNQ9H1K0 784 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 PRDM11Q9NQV5 511 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 USP35Q9P2H5 1018 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 NRXN3Q9Y4C0 1643 aa8.28□□□□□ -1.08
AP3S1-202ENST00000395548 KIAA1210Q9ULL0 1709 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 LOC102724428A0A0B4J2F2 783 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 GHRHP01286 108 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 SIK1P57059 783 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 HFE2Q6ZVN8 426 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 WFDC8Q8IUA0 241 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 DTWD1Q8N5C7 304 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 SMG9Q9H0W8 520 aaKnown RBP8.27□□□□□ -1.09
AP3S1-202ENST00000395548 THRAP3Q9Y2W1 955 aaKnown RBP8.27□□□□□ -1.09
AP3S1-202ENST00000395548 TULP4Q9NRJ4 1543 aa8.27□□□□□ -1.09
AP3S1-202ENST00000395548 HOXD8P13378 290 aaPredicted RBP8.26□□□□□ -1.09
AP3S1-202ENST00000395548 EVA1CP58658 441 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 NRG1Q02297 640 aaPredicted RBP8.26□□□□□ -1.09
AP3S1-202ENST00000395548 DOC2BQ14184 412 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 TRIP4Q15650 581 aaPredicted RBP8.26□□□□□ -1.09
AP3S1-202ENST00000395548 GRIK5Q16478 980 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
AP3S1-202ENST00000395548 FAM26DQ5JW98 314 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 KIF1AQ12756 1690 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
AP3S1-202ENST00000395548 CTCFP49711 727 aaPredicted RBP8.25□□□□□ -1.09
AP3S1-202ENST00000395548 FMR1NBQ8N0W7 255 aaPredicted RBP8.25□□□□□ -1.09
AP3S1-202ENST00000395548 GPR152Q8TDT2 470 aa8.25□□□□□ -1.09
AP3S1-202ENST00000395548 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
AP3S1-202ENST00000395548 LENG1Q96BZ8 264 aaPredicted RBP8.25□□□□□ -1.09
AP3S1-202ENST00000395548 SEPT3Q9UH03 358 aa8.25□□□□□ -1.09
AP3S1-202ENST00000395548 TECPR2O15040 1411 aa8.25□□□□□ -1.09
AP3S1-202ENST00000395548 MYOM3Q5VTT5 1437 aa8.25□□□□□ -1.09
AP3S1-202ENST00000395548 ARHGEF28Q8N1W1 1705 aaKnown RBP8.24□□□□□ -1.09
AP3S1-202ENST00000395548 ABCA3Q99758 1704 aa8.24□□□□□ -1.09
AP3S1-202ENST00000395548 CCDC85CA6NKD9 419 aa8.24□□□□□ -1.09
AP3S1-202ENST00000395548 J3QW42 95 aa8.24□□□□□ -1.09
AP3S1-202ENST00000395548 RPLP1P05386 114 aaKnown RBP8.24□□□□□ -1.09
AP3S1-202ENST00000395548 TTC39BQ5VTQ0 682 aaPredicted RBP8.24□□□□□ -1.09
AP3S1-202ENST00000395548 NSUN5Q96P11 429 aaKnown RBP8.24□□□□□ -1.09
AP3S1-202ENST00000395548 NAIPQ13075 1403 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 ZBTB39O15060 712 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 SELPP16109 830 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 ADGRE1Q14246 886 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 HELQQ8TDG4 1101 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
AP3S1-202ENST00000395548 IQGAP3Q86VI3 1631 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 TMEM88BA6NKF7 163 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 FOXN1O15353 648 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 PCSK2P16519 638 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 SSFA2P28290 1259 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 FBXO11Q86XK2 927 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 CACTIN-AS1Q8N1I8 211 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 SMC1BQ8NDV3 1235 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 NMRK2Q9NPI5 230 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 MTMR7Q9Y216 660 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 CD2APQ9Y5K6 639 aa8.22□□□□□ -1.09
AP3S1-202ENST00000395548 TNRC18O15417 2968 aaPredicted RBP8.21□□□□□ -1.09
AP3S1-202ENST00000395548 HYAL2Q12891 473 aa8.21□□□□□ -1.1
AP3S1-202ENST00000395548 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
AP3S1-202ENST00000395548 TXNRD3Q86VQ6 643 aa8.21□□□□□ -1.1
AP3S1-202ENST00000395548 TTC16Q8NEE8 873 aa8.21□□□□□ -1.1
AP3S1-202ENST00000395548 SEMA6BQ9H3T3 888 aa8.21□□□□□ -1.1
AP3S1-202ENST00000395548 ABI2Q9NYB9 513 aaPredicted RBP8.21□□□□□ -1.1
AP3S1-202ENST00000395548 SCNN1AP37088 669 aa8.2□□□□□ -1.1
AP3S1-202ENST00000395548 NOM1Q5C9Z4 860 aaKnown RBP8.2□□□□□ -1.1
AP3S1-202ENST00000395548 GDF6Q6KF10 455 aaPredicted RBP8.2□□□□□ -1.1
AP3S1-202ENST00000395548 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
AP3S1-202ENST00000395548 SHISA2Q6UWI4 295 aa8.2□□□□□ -1.1
AP3S1-202ENST00000395548 TPSG1Q9NRR2 321 aa8.2□□□□□ -1.1
AP3S1-202ENST00000395548 ANKRD30AQ9BXX3 1397 aa8.2□□□□□ -1.1
AP3S1-202ENST00000395548 DDB1Q16531 1140 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 IGF2-ASQ6U949 168 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 IL22RA1Q8N6P7 574 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 DCAF11Q8TEB1 546 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
AP3S1-202ENST00000395548 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
AP3S1-202ENST00000395548 MUC3BQ9H195 1237 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 SRA1Q9HD15 236 aaKnown RBP8.19□□□□□ -1.1
AP3S1-202ENST00000395548 BCL9O00512 1426 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 SSH2Q76I76 1423 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 ATP7BP35670 1465 aa8.19□□□□□ -1.1
AP3S1-202ENST00000395548 TOPAZ1Q8N9V7 1692 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
AP3S1-202ENST00000395548 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 PTF1AQ7RTS3 328 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 ZNF438Q7Z4V0 828 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 MAP4K3Q8IVH8 894 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 ARID3AQ99856 593 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 ELP3Q9H9T3 547 aa8.18□□□□□ -1.1
AP3S1-202ENST00000395548 PDE4DIPQ5VU43 2346 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 CHRNA2Q15822 529 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 NKAPLQ5M9Q1 402 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 XKR5Q6UX68 686 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 ATCAYQ86WG3 371 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 EDEM1Q92611 657 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 GCC1Q96CN9 775 aa8.17□□□□□ -1.1
AP3S1-202ENST00000395548 KDM2BQ8NHM5 1336 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms