RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 SLC16A10Q8TF71 515 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 PHF14O94880 888 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 FMNL1O95466 1100 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 RHBDL3P58872 404 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 C12orf60Q5U649 245 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 CCDC125Q86Z20 511 aa16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 ELOA2Q8IYF1 753 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE2-202ENST00000395246 A0A0G2JS52 829 aa16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 PRKAB2O43741 272 aa16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 NASPP49321 788 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 DDAH1O94760 285 aa16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 FBXO18Q8NFZ0 1043 aa16.65■□□□□ 0.26
CDC42SE2-202ENST00000395246 MRE11P49959 708 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 CCDC178Q5BJE1 867 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 MFSD6Q6ZSS7 791 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 BRAPQ7Z569 592 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 JAK2O60674 1132 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 CDKL5O76039 1030 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 HHIPL2Q6UWX4 724 aa16.64■□□□□ 0.25
CDC42SE2-202ENST00000395246 POLR3EQ9NVU0 708 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 RTEL1Q9NZ71 1219 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 COL4A5P29400 1685 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 LDHCP07864 332 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 PRDX5P30044 214 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 MMP14P50281 582 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 TMEM63CQ9P1W3 806 aa16.63■□□□□ 0.25
CDC42SE2-202ENST00000395246 PLCG2P16885 1265 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 GABPAQ06546 454 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 TRDNQ13061 729 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 LOC285556D6RIA3 1793 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 IGKV6D-41A0A0C4DH26 115 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 SLF2Q8IX21 1173 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 ANO8Q9HCE9 1232 aaPredicted RBP16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 CALM1P0DP23 149 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 CALM2P0DP24 149 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 CALM3P0DP25 149 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 TCEANC2Q96MN5 208 aa16.62■□□□□ 0.25
CDC42SE2-202ENST00000395246 RANBP6O60518 1105 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 CDC27P30260 824 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 TROAPQ12815 778 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 C16orf86Q6ZW13 317 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 DGKHQ86XP1 1220 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 ESR2Q92731 530 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 NSFL1CQ9UNZ2 370 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 ATRNL1Q5VV63 1379 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 KLF18A0A0U1RQI7 1052 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 RBM28Q9NW13 759 aaKnown RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 ZSCAN10Q96SZ4 725 aaPredicted RBP16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 EHD4Q9H223 541 aa16.61■□□□□ 0.25
CDC42SE2-202ENST00000395246 A0A1W2PQ27 194 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 A0A1W2PQ64 194 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 A0A1W2PQD8 194 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 B4E1Z4 1266 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 PRPF40AO75400 957 aaKnown RBP16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 DYNLL1P63167 89 aaKnown RBP16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 KRT85P78386 507 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 GAS2L3Q86XJ1 694 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 TTC6Q86TZ1 520 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 LEO1Q8WVC0 666 aaPredicted RBP16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 PPP1R9BQ96SB3 815 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 CNPY2Q9Y2B0 182 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 MYH4Q9Y623 1939 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 YEATS4O95619 227 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 PSMD1Q99460 953 aa16.6■□□□□ 0.25
CDC42SE2-202ENST00000395246 CTDSPL2Q05D32 466 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 GRIK5Q16478 980 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 ENAHQ8N8S7 591 aaPredicted RBP16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 SENP2Q9HC62 589 aa16.59■□□□□ 0.25
CDC42SE2-202ENST00000395246 PRPF3O43395 683 aaKnown RBP16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 UFL1O94874 794 aa16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 HAND2P61296 217 aa16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 SLC51AQ86UW1 340 aa16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 VPS37DQ86XT2 251 aa16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 LARP6Q9BRS8 491 aaKnown RBP16.58■□□□□ 0.25
CDC42SE2-202ENST00000395246 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms