RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PIH1D3Q9NQM4 214 aaKnown RBP10.93□□□□□ -0.66
ATG4A-205ENST00000394892 TMOD2Q9NZR1 351 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 OTOFQ9HC10 1997 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 CCL15-CCL14A0A0B4J2E2 113 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 CYP2E1P05181 493 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-205ENST00000394892 RRP1BQ14684 758 aaKnown RBP10.92□□□□□ -0.66
ATG4A-205ENST00000394892 CCL15Q16663 113 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 ERO1BQ86YB8 467 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 ZNF341Q9BYN7 854 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 CCDC8Q9H0W5 538 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-205ENST00000394892 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
ATG4A-205ENST00000394892 EXOC6BQ9Y2D4 811 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 COG6Q9Y2V7 657 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
ATG4A-205ENST00000394892 BTBD19C9JJ37 291 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 ENTPD3O75355 529 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 ZAP70P43403 619 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 PPIL2Q13356 520 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 NOL9Q5SY16 702 aaKnown RBP10.91□□□□□ -0.66
ATG4A-205ENST00000394892 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 OTOP1Q7RTM1 612 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
ATG4A-205ENST00000394892 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
ATG4A-205ENST00000394892 CSADQ9Y600 493 aa10.91□□□□□ -0.66
ATG4A-205ENST00000394892 UQCRFS1P1P0C7P4 283 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 GTF2A2P52657 109 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 GORABQ5T7V8 394 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 DCAF15Q66K64 600 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 SPTY2D1Q68D10 685 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-205ENST00000394892 CCDC84Q86UT8 332 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-205ENST00000394892 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-205ENST00000394892 CD99L2Q8TCZ2 262 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 ZNF512BQ96KM6 892 aaPredicted RBP10.9□□□□□ -0.66
ATG4A-205ENST00000394892 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 ANTXR1Q9H6X2 564 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 RCAN3Q9UKA8 241 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 KCNH4Q9UQ05 1017 aa10.9□□□□□ -0.66
ATG4A-205ENST00000394892 FAM196BA6NMK8 535 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 CTGFP29279 349 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 JAG1P78504 1218 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 PPATQ06203 517 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
ATG4A-205ENST00000394892 PICALMQ13492 652 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 GPAT2Q6NUI2 795 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 SH3RF3Q8TEJ3 882 aaPredicted RBP10.89□□□□□ -0.67
ATG4A-205ENST00000394892 RAI14Q9P0K7 980 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 PTPN22Q9Y2R2 807 aa10.89□□□□□ -0.67
ATG4A-205ENST00000394892 TNRC18O15417 2968 aaPredicted RBP10.89□□□□□ -0.67
ATG4A-205ENST00000394892 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
ATG4A-205ENST00000394892 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
ATG4A-205ENST00000394892 DYNLL1P63167 89 aaKnown RBP10.88□□□□□ -0.67
ATG4A-205ENST00000394892 SP3Q02447 781 aa10.88□□□□□ -0.67
ATG4A-205ENST00000394892 SHROOM1Q2M3G4 852 aaPredicted RBP10.88□□□□□ -0.67
ATG4A-205ENST00000394892 HABP4Q5JVS0 413 aaKnown RBP10.88□□□□□ -0.67
ATG4A-205ENST00000394892 TTC39AQ5SRH9 613 aa10.88□□□□□ -0.67
ATG4A-205ENST00000394892 ARHGAP39Q9C0H5 1083 aa10.88□□□□□ -0.67
ATG4A-205ENST00000394892 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
ATG4A-205ENST00000394892 CETPP11597 493 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 PTPRAP18433 802 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 PPP4CP60510 307 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 SNAPC2Q13487 334 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 TAF1CQ15572 869 aaPredicted RBP10.87□□□□□ -0.67
ATG4A-205ENST00000394892 RHPN1Q8TCX5 695 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 HOOK2Q96ED9 719 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 OSBPL5Q9H0X9 879 aaPredicted RBP10.87□□□□□ -0.67
ATG4A-205ENST00000394892 RNF39Q9H2S5 420 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 DNAJC18Q9H819 358 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 AATFQ9NY61 560 aaKnown RBP eCLIP10.87□□□□□ -0.676e-7■■■■■ 46.9
ATG4A-205ENST00000394892 LRP2BPQ9P2M1 347 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 LAMB1P07942 1786 aa10.87□□□□□ -0.67
ATG4A-205ENST00000394892 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 TBC1D12O60347 775 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 TLR2O60603 784 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 LDHCP07864 332 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 C17orf99Q6UX52 265 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 AACSQ86V21 672 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 SLF2Q8IX21 1173 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 TEX11Q8IYF3 940 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 SCYL3Q8IZE3 742 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 ZHX2Q9Y6X8 837 aa10.86□□□□□ -0.67
ATG4A-205ENST00000394892 CHGBP05060 677 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 GSTO1P78417 241 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 KIF22Q14807 665 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 NAA16Q6N069 864 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-205ENST00000394892 ANKRD23Q86SG2 305 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 MAPKAPK5Q8IW41 473 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 ZSCAN29Q8IWY8 852 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-205ENST00000394892 RPAP2Q8IXW5 612 aaPredicted RBP10.85□□□□□ -0.67
ATG4A-205ENST00000394892 EDC3Q96F86 508 aaKnown RBP10.85□□□□□ -0.67
ATG4A-205ENST00000394892 DDX19BQ9UMR2 479 aa10.85□□□□□ -0.67
ATG4A-205ENST00000394892 A0A0G2JLL6 359 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms