RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 PNOCQ13519 176 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 SAMD1Q6SPF0 538 aaPredicted RBP21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 MAP7D2Q96T17 732 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 SRP68Q9UHB9 627 aaKnown RBP21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 IL17RAQ96F46 866 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 DHX8Q14562 1220 aaKnown RBP21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 PRIMPOLQ96LW4 560 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 KAT14Q9H8E8 782 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 COL5A2P05997 1499 aaPredicted RBP21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 UBN2Q6ZU65 1347 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 POLR2DO15514 142 aaKnown RBP21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 CDC27P30260 824 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 TXLNAP40222 546 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 ANKRD20A12PQ8NF67 263 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 SLC4A9Q96Q91 983 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 PLA2G12BQ9BX93 195 aa21.6■■□□□ 1.05
SMARCC2-203ENST00000394023 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 FDPSP14324 419 aaKnown RBP21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 ANTXR2P58335 489 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 ZNF174Q15697 407 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 DPCR1Q3MIW9 517 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 DACH1Q9UI36 760 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 DCCP43146 1447 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 TNKSO95271 1327 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 V9GYY5 206 aaPredicted RBP21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 CAMTA1Q9Y6Y1 1673 aa21.59■■□□□ 1.05
SMARCC2-203ENST00000394023 STX17P56962 302 aa21.58■■□□□ 1.05
SMARCC2-203ENST00000394023 MNS1Q8NEH6 495 aa21.58■■□□□ 1.05
SMARCC2-203ENST00000394023 DEXIO95424 95 aa21.58■■□□□ 1.05
SMARCC2-203ENST00000394023 PTPN21Q16825 1174 aa21.58■■□□□ 1.04
SMARCC2-203ENST00000394023 FANCBQ8NB91 859 aa21.58■■□□□ 1.04
SMARCC2-203ENST00000394023 F8W031 263 aaPredicted RBP21.58■■□□□ 1.04
SMARCC2-203ENST00000394023 CEP135Q66GS9 1140 aa21.58■■□□□ 1.04
SMARCC2-203ENST00000394023 NYXQ9GZU5 481 aa21.58■■□□□ 1.04
SMARCC2-203ENST00000394023 EIF5P55010 431 aaKnown RBP21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 NR5A1Q13285 461 aa21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 KIF28PB7ZC32 967 aa21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 GSDMDP57764 484 aa21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 PDCL2Q8N4E4 241 aa21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 STAMQ92783 540 aa21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 MED1Q15648 1581 aaPredicted RBP21.57■■□□□ 1.04
SMARCC2-203ENST00000394023 TDRD7Q8NHU6 1098 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 PDCL3Q9H2J4 239 aa21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 SAP30BPQ9UHR5 308 aaKnown RBP21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 ARID5BQ14865 1188 aa21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 MARCH10Q8NA82 808 aaPredicted RBP21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 FILIP1LQ4L180 1135 aa21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 NOSTRINQ8IVI9 506 aa21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 ZNF34Q8IZ26 560 aa21.56■■□□□ 1.04
SMARCC2-203ENST00000394023 ITPK1Q13572 414 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 MTERF4Q7Z6M4 381 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 XPO4Q9C0E2 1151 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 CCDC194A0A1B0GVG4 234 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 NEMFO60524 1076 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 ZNF827Q17R98 1081 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 TSR1Q2NL82 804 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 PPFIBP1Q86W92 1011 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 RIOK3O14730 519 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 TSPY3P0CV98 308 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 TSPY8P0CW00 308 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 MCM7P33993 719 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 SLC39A14Q15043 492 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 KIF18AQ8NI77 898 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 CACTINQ8WUQ7 758 aaKnown RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 POLR3EQ9NVU0 708 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 VWA3AA6NCI4 1184 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 CMA1P23946 247 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 RILPL1Q5EBL4 403 aa21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 ZNF219Q9P2Y4 722 aaPredicted RBP21.55■■□□□ 1.04
SMARCC2-203ENST00000394023 CELF1Q92879 486 aaKnown RBP21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 BAG3O95817 575 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 KRT2P35908 639 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 GSG1L2A8MUP6 293 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 AP5Z1O43299 807 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 LDHBP07195 334 aaKnown RBP21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 SOGA3Q5TF21 947 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 TRIM34Q9BYJ4 488 aa21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.54■■□□□ 1.04
SMARCC2-203ENST00000394023 KIF5BP33176 963 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 NLRP12P59046 1061 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 CBX1P83916 185 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 SPTY2D1Q68D10 685 aaPredicted RBP21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 TCHHQ07283 1943 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 TRMT44Q8IYL2 757 aaKnown RBP21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 KIAA1524Q8TCG1 905 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 RTL9Q8NET4 1388 aa21.53■■□□□ 1.04
SMARCC2-203ENST00000394023 MYL5Q02045 173 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 TRAPPC3LQ5T215 181 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 HEATR3Q7Z4Q2 680 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 PLIN2Q99541 437 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 A0A1W2PQ27 194 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 A0A1W2PQ64 194 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 A0A1W2PQD8 194 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 CUTAO60888 179 aa21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 SNW1Q13573 536 aaKnown RBP21.52■■□□□ 1.04
SMARCC2-203ENST00000394023 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms