RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ERCC3P19447 782 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 DNA2P51530 1060 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 RAD9BQ6WBX8 426 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 FAM204AQ9H8W3 233 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 KCNH3Q9ULD8 1083 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 TMEM94Q12767 1356 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 MATR3P43243 847 aaKnown RBP eCLIP16.62■□□□□ 0.25
SFXN3-202ENST00000393459 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
SFXN3-202ENST00000393459 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 GUCA1BQ9UMX6 200 aa16.62■□□□□ 0.25
SFXN3-202ENST00000393459 B4E1Z4 1266 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 TXLNAP40222 546 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 LIG3P49916 1009 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 USPL1Q5W0Q7 1092 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 KRT40Q6A162 431 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 RBL2Q08999 1139 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 SF3A3Q12874 501 aaKnown RBP eCLIP16.61■□□□□ 0.251e-7■■■□□ 16.1
SFXN3-202ENST00000393459 SCARF1Q14162 830 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 CCDC102BQ68D86 513 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SFXN3-202ENST00000393459 SLF1Q9BQI6 1058 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 PUS7LQ9H0K6 701 aaKnown RBP16.61■□□□□ 0.25
SFXN3-202ENST00000393459 NLRP2Q9NX02 1062 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 BTBD18B2RXH4 712 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 CBFA2T2O43439 604 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 EXOSC10Q01780 885 aaKnown RBP16.61■□□□□ 0.25
SFXN3-202ENST00000393459 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
SFXN3-202ENST00000393459 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
SFXN3-202ENST00000393459 VPS16Q9H269 839 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
SFXN3-202ENST00000393459 EIF3CLB5ME19 914 aaKnown RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 NR5A1Q13285 461 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 TMEM139Q8IV31 216 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 EIF3CQ99613 913 aaKnown RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 ANKZF1Q9H8Y5 726 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 MST1RQ04912 1400 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 BAZ2BQ9UIF8 2168 aaKnown RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 FAM170AA1A519 330 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
SFXN3-202ENST00000393459 LLPHQ9BRT6 129 aaKnown RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 TRPM3Q9HCF6 1732 aaPredicted RBP16.6■□□□□ 0.25
SFXN3-202ENST00000393459 KIF5CO60282 957 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 CASP14P31944 242 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 TTC31Q49AM3 519 aaPredicted RBP16.59■□□□□ 0.25
SFXN3-202ENST00000393459 SPECC1LQ69YQ0 1117 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 PPFIBP1Q86W92 1011 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 IGSF22Q8N9C0 903 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 GOLGA5Q8TBA6 731 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 HAUS7Q99871 368 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 LRRIQ3A6PVS8 624 aaPredicted RBP16.59■□□□□ 0.25
SFXN3-202ENST00000393459 GUCY1A2P33402 732 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 METAP2P50579 478 aaKnown RBP eCLIP16.59■□□□□ 0.25
SFXN3-202ENST00000393459 EP400NLQ6ZTU2 488 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 CADPS2Q86UW7 1296 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 TRDNQ13061 729 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 IMMTQ16891 758 aaKnown RBP16.59■□□□□ 0.25
SFXN3-202ENST00000393459 KIFC2Q96AC6 838 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
SFXN3-202ENST00000393459 CCDC175P0C221 793 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 CMA1P23946 247 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 CASP8Q14790 479 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 BLZF1Q9H2G9 400 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
SFXN3-202ENST00000393459 HPS5Q9UPZ3 1129 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 FAM205CA6NFA0 338 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 SNAP23O00161 211 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 ZNF213O14771 459 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 CCP110O43303 1012 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 CUTAO60888 179 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 TRIM29Q14134 588 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
SFXN3-202ENST00000393459 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
SFXN3-202ENST00000393459 GOLGA6L1Q8N7Z2 621 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 A0A1W2PQD8 194 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 ANTXR2P58335 489 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 PDIA6Q15084 440 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 TSGA10IPQ3SY00 556 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 RABGGTAQ92696 567 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 JRKLQ9Y4A0 524 aa16.57■□□□□ 0.24
SFXN3-202ENST00000393459 ZAP70P43403 619 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
SFXN3-202ENST00000393459 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 BEND6Q5SZJ8 279 aaPredicted RBP16.56■□□□□ 0.24
SFXN3-202ENST00000393459 RSRC2Q7L4I2 434 aaKnown RBP16.56■□□□□ 0.24
SFXN3-202ENST00000393459 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 NUP88Q99567 741 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms