RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
CASP4-201ENST00000393150 ADH1BP00325 375 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 F12P00748 615 aaPredicted RBP10.16□□□□□ -0.78
CASP4-201ENST00000393150 ANXA1P04083 346 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 MMP16P51512 607 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 DLGAP5Q15398 846 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 LDLRAD1Q5T700 205 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 STRIP1Q5VSL9 837 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 CHMP4AQ9BY43 222 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 R3HDMLQ9H3Y0 253 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 IL21Q9HBE4 155 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 SCAF8Q9UPN6 1271 aaKnown RBP10.16□□□□□ -0.78
CASP4-201ENST00000393150 PPP2R3BQ9Y5P8 575 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 NDUFB9Q9Y6M9 179 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 ANKRD36CQ5JPF3 1778 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 ZNF609O15014 1411 aa10.16□□□□□ -0.78
CASP4-201ENST00000393150 ATP5J2-PTCD1G3V325 749 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 APBB1O00213 710 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 GNRH1P01148 92 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 HOXD10P28358 340 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 CRHR2Q13324 411 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 TTLL5Q6EMB2 1281 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 ZBTB38Q8NAP3 1195 aaPredicted RBP10.15□□□□□ -0.78
CASP4-201ENST00000393150 WNK4Q96J92 1243 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 ZNF333Q96JL9 665 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 GMLQ99445 158 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 COA1Q9GZY4 146 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 DEFB129Q9H1M3 183 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
CASP4-201ENST00000393150 DDX60Q8IY21 1712 aaKnown RBP10.15□□□□□ -0.78
CASP4-201ENST00000393150 MYCP01106 439 aaPredicted RBP10.14□□□□□ -0.79
CASP4-201ENST00000393150 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
CASP4-201ENST00000393150 ABL2P42684 1182 aa10.14□□□□□ -0.79
CASP4-201ENST00000393150 PRMT2P55345 433 aa10.14□□□□□ -0.79
CASP4-201ENST00000393150 TRIM28Q13263 835 aaKnown RBP10.14□□□□□ -0.79
CASP4-201ENST00000393150 PTPRNQ16849 979 aa10.14□□□□□ -0.79
CASP4-201ENST00000393150 PROSER3Q2NL68 480 aa10.14□□□□□ -0.79
CASP4-201ENST00000393150 DBF4Q9UBU7 674 aaPredicted RBP10.14□□□□□ -0.79
CASP4-201ENST00000393150 PDE8AO60658 829 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 SASH1O94885 1247 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 KCNJ4P48050 445 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 RIPK4P57078 832 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 TAF1CQ15572 869 aaPredicted RBP10.13□□□□□ -0.79
CASP4-201ENST00000393150 HDGFL1Q5TGJ6 251 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 ANKRD13AQ8IZ07 590 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 ZNF428Q96B54 188 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 ISCA1Q9BUE6 129 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
CASP4-201ENST00000393150 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
CASP4-201ENST00000393150 MKI67P46013 3256 aaKnown RBP10.13□□□□□ -0.79
CASP4-201ENST00000393150 A0A1W2PPC1 479 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 IGF2BP3O00425 579 aaKnown RBP eCLIP10.12□□□□□ -0.79
CASP4-201ENST00000393150 GTF2A2P52657 109 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 MAP3K11Q16584 847 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 LRP10Q7Z4F1 713 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 KIAA0825Q8IV33 1275 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 CCER1Q8TC90 406 aaPredicted RBP10.12□□□□□ -0.79
CASP4-201ENST00000393150 SEC31BQ9NQW1 1179 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 CHPF2Q9P2E5 772 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
CASP4-201ENST00000393150 COL1A1P02452 1464 aaPredicted RBP10.12□□□□□ -0.79
CASP4-201ENST00000393150 DUOX1Q9NRD9 1551 aa10.12□□□□□ -0.79
CASP4-201ENST00000393150 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
CASP4-201ENST00000393150 CAPN2P17655 700 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 IGHMBP2P38935 993 aaKnown RBP10.11□□□□□ -0.79
CASP4-201ENST00000393150 RBM5P52756 815 aaKnown RBP eCLIP10.11□□□□□ -0.79
CASP4-201ENST00000393150 DACT2Q5SW24 774 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 CCDC191Q8NCU4 936 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 ANKRD2Q9GZV1 360 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 VEZTQ9HBM0 779 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 MAP10Q9P2G4 905 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 LEMD3Q9Y2U8 911 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 CSADQ9Y600 493 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 PTCH2Q9Y6C5 1203 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 MED23Q9ULK4 1368 aa10.11□□□□□ -0.79
CASP4-201ENST00000393150 POM121CA8CG34 1229 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 HOXB7P09629 217 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 UBXN2AP68543 259 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 RAET1EQ8TD07 263 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
CASP4-201ENST00000393150 EVA1BQ9NVM1 165 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 BSDC1Q9NW68 430 aaPredicted RBP10.1□□□□□ -0.79
CASP4-201ENST00000393150 CWC25Q9NXE8 425 aaPredicted RBP10.1□□□□□ -0.79
CASP4-201ENST00000393150 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
CASP4-201ENST00000393150 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
CASP4-201ENST00000393150 CCT4P50991 539 aaKnown RBP10.09□□□□□ -0.79
CASP4-201ENST00000393150 OPTNQ96CV9 577 aa10.09□□□□□ -0.79
CASP4-201ENST00000393150 CLMNQ96JQ2 1002 aa10.09□□□□□ -0.79
CASP4-201ENST00000393150 TRIM47Q96LD4 638 aa10.09□□□□□ -0.79
CASP4-201ENST00000393150 MPHOSPH8Q99549 860 aa10.09□□□□□ -0.79
CASP4-201ENST00000393150 LAMB2P55268 1798 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 KDM3BQ7LBC6 1761 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 CCL15-CCL14A0A0B4J2E2 113 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 TNNI2P48788 182 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 GTF2IP78347 998 aa10.08□□□□□ -0.8
CASP4-201ENST00000393150 NEXNQ0ZGT2 675 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms