RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 GOLGA8BA8MQT2 603 aa17.31■□□□□ 0.36
SHTN1-204ENST00000392903 NRDCO43847 1150 aa17.31■□□□□ 0.36
SHTN1-204ENST00000392903 RASGRF1Q13972 1273 aa17.31■□□□□ 0.36
SHTN1-204ENST00000392903 NEK11Q8NG66 645 aa17.31■□□□□ 0.36
SHTN1-204ENST00000392903 GJB4Q9NTQ9 266 aa17.31■□□□□ 0.36
SHTN1-204ENST00000392903 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
SHTN1-204ENST00000392903 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
SHTN1-204ENST00000392903 COL22A1Q8NFW1 1626 aaPredicted RBP17.31■□□□□ 0.36
SHTN1-204ENST00000392903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.3■□□□□ 0.36
SHTN1-204ENST00000392903 CCP110O43303 1012 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 UQCRFS1P1P0C7P4 283 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 BCAMP50895 628 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 TBC1D10CQ8IV04 446 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 BPIFA3Q9BQP9 254 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 HPS5Q9UPZ3 1129 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 TADA3O75528 432 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 SLC5A1P13866 664 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 TRDNQ13061 729 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 UBE3CQ15386 1083 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 MAGEB6Q8N7X4 407 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
SHTN1-204ENST00000392903 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 A0A087WWV3 80 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 POLR3GO15318 223 aaPredicted RBP17.29■□□□□ 0.36
SHTN1-204ENST00000392903 EVCP57679 992 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 GPS2Q13227 327 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 IQSEC3Q9UPP2 1182 aaPredicted RBP17.29■□□□□ 0.36
SHTN1-204ENST00000392903 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 TCRBV5S4A2TA0A5A2 114 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 RXRAP19793 462 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 CYB5R4Q7L1T6 521 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 TMC6Q7Z403 805 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
SHTN1-204ENST00000392903 XPO4Q9C0E2 1151 aaKnown RBP17.29■□□□□ 0.36
SHTN1-204ENST00000392903 CPLX1O14810 134 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 MNS1Q8NEH6 495 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 AK7Q96M32 723 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 WTIPA6NIX2 430 aaPredicted RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 B4E1Z4 1266 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 NTSR2O95665 410 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 ST5P78524 1137 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 FAM98CQ17RN3 349 aaKnown RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 SMARCE1Q969G3 411 aa17.28■□□□□ 0.36
SHTN1-204ENST00000392903 STRBPQ96SI9 672 aaKnown RBP17.28■□□□□ 0.36
SHTN1-204ENST00000392903 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.36
SHTN1-204ENST00000392903 PARP10Q53GL7 1025 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 FSIP1Q8NA03 581 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 ARMT1Q9H993 441 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 EFCC1Q9HA90 598 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 SENP2Q9HC62 589 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 IFNKQ9P0W0 207 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 DNAI1Q9UI46 699 aa17.27■□□□□ 0.36
SHTN1-204ENST00000392903 MBD4O95243 580 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 TBC1D8O95759 1140 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 TRIM65Q6PJ69 517 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 BICDL1Q6ZP65 573 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 RASSF4Q9H2L5 321 aa17.27■□□□□ 0.35
SHTN1-204ENST00000392903 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
SHTN1-204ENST00000392903 SMC2O95347 1197 aa17.26■□□□□ 0.35
SHTN1-204ENST00000392903 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
SHTN1-204ENST00000392903 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
SHTN1-204ENST00000392903 ZNF396Q96N95 335 aaPredicted RBP17.26■□□□□ 0.35
SHTN1-204ENST00000392903 OAS2P29728 719 aaKnown RBP17.26■□□□□ 0.35
SHTN1-204ENST00000392903 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
SHTN1-204ENST00000392903 CHRNDQ07001 517 aa17.26■□□□□ 0.35
SHTN1-204ENST00000392903 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
SHTN1-204ENST00000392903 PRKAB2O43741 272 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 SASH3O75995 380 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 SEC31AO94979 1220 aaKnown RBP17.25■□□□□ 0.35
SHTN1-204ENST00000392903 ME1P48163 572 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 ZSCAN26Q16670 478 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 PTF1AQ7RTS3 328 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
SHTN1-204ENST00000392903 NEDD4P46934 1319 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 SMC1AQ14683 1233 aaKnown RBP17.25■□□□□ 0.35
SHTN1-204ENST00000392903 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
SHTN1-204ENST00000392903 IFNL3Q8IZI9 196 aa17.25■□□□□ 0.35
SHTN1-204ENST00000392903 ERFEQ4G0M1 354 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 MIGA1Q8NAN2 632 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 CHMP4CQ96CF2 233 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 NAPBQ9H115 298 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 EPB41L4AQ9HCS5 686 aaPredicted RBP17.24■□□□□ 0.35
SHTN1-204ENST00000392903 PSD3Q9NYI0 1048 aa17.24■□□□□ 0.35
SHTN1-204ENST00000392903 CWC15Q9P013 229 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms