RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 BAZ2BQ9UIF8 2168 aaKnown RBP10.87□□□□□ -0.67
USP30-203ENST00000392784 PDS5AQ29RF7 1337 aaKnown RBP10.87□□□□□ -0.67
USP30-203ENST00000392784 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
USP30-203ENST00000392784 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 USP17L21D6R901 530 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 ZBTB43O43298 467 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
USP30-203ENST00000392784 SGMS1Q86VZ5 419 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 TDRD7Q8NHU6 1098 aaKnown RBP10.87□□□□□ -0.67
USP30-203ENST00000392784 CNNM2Q9H8M5 875 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 POLLQ9UGP5 575 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 LEMD3Q9Y2U8 911 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 LRRC37AA6NMS7 1700 aa10.87□□□□□ -0.67
USP30-203ENST00000392784 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 POLR3DP05423 398 aaPredicted RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 SYAP1Q96A49 352 aaPredicted RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 RBM17Q96I25 401 aaKnown RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 C8orf76Q96K31 380 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 KRT23Q9C075 422 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 SCAND2PQ9GZW5 306 aaPredicted RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 ZSCAN16Q9H4T2 348 aaPredicted RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 LIFRP42702 1097 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 CAMK4Q16566 473 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 CCDC82Q8N4S0 544 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 BRIP1Q9BX63 1249 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 TSPY26PQ9H489 355 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 DCP1AQ9NPI6 582 aaPredicted RBP10.86□□□□□ -0.67
USP30-203ENST00000392784 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 ANAPC4Q9UJX5 808 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 DLEC1Q9Y238 1755 aa10.86□□□□□ -0.67
USP30-203ENST00000392784 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 DHX16O60231 1041 aaKnown RBP10.85□□□□□ -0.67
USP30-203ENST00000392784 NMT2O60551 498 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 WTAPQ15007 396 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 TNKSO95271 1327 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 NR1I2O75469 434 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 ZNF772Q68DY9 489 aaPredicted RBP10.85□□□□□ -0.67
USP30-203ENST00000392784 SH3RF3Q8TEJ3 882 aaPredicted RBP10.85□□□□□ -0.67
USP30-203ENST00000392784 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 CD209Q9NNX6 404 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 DACT1Q9NYF0 836 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 GGA1Q9UJY5 639 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 KIF3AQ9Y496 699 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 NAV1Q8NEY1 1877 aa10.85□□□□□ -0.67
USP30-203ENST00000392784 PLSCR1O15162 318 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 LDHBP07195 334 aaKnown RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 HOXA10P31260 410 aaPredicted RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 SEC23AQ15436 765 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 ENAHQ8N8S7 591 aaPredicted RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 TBC1D16Q8TBP0 767 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 CLIC4Q9Y696 253 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 KLRG2A4D1S0 409 aaPredicted RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 KIF23Q02241 960 aaPredicted RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 FAM47AQ5JRC9 791 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 ZNF654Q8IZM8 581 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 NUP133Q8WUM0 1156 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 FUCA2Q9BTY2 467 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 SLC26A6Q9BXS9 759 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 CRNKL1Q9BZJ0 848 aaKnown RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 GOLPH3LQ9H4A5 285 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 RNF41Q9H4P4 317 aaPredicted RBP10.84□□□□□ -0.67
USP30-203ENST00000392784 ADAMTSL1Q8N6G6 1762 aa10.84□□□□□ -0.67
USP30-203ENST00000392784 RIMBP2O15034 1052 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 MMP10P09238 476 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 BICD2Q8TD16 824 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 UBAC1Q9BSL1 405 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 RCOR1Q9UKL0 485 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP30-203ENST00000392784 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
USP30-203ENST00000392784 GOLGA6L4A6NEF3 574 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 C6orf229H3BNL8 230 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 PPEF1O14829 653 aaPredicted RBP10.83□□□□□ -0.68
USP30-203ENST00000392784 ATP2B4P23634 1241 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 IARSP41252 1262 aaKnown RBP10.83□□□□□ -0.68
USP30-203ENST00000392784 KRT40Q6A162 431 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 C15orf52Q6ZUT6 534 aaKnown RBP10.83□□□□□ -0.68
USP30-203ENST00000392784 CKAP2LQ8IYA6 745 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 WDR66Q8TBY9 1149 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 ESR2Q92731 530 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 CRAMP1Q96RY5 1269 aa10.83□□□□□ -0.68
USP30-203ENST00000392784 RGS17Q9UGC6 210 aaPredicted RBP10.83□□□□□ -0.68
USP30-203ENST00000392784 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 BBOX1O75936 387 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 RXRBP28702 533 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 RTN1Q16799 776 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 NBPF11Q86T75 865 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 SHISA4Q96DD7 197 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 DYNLL2Q96FJ2 89 aa10.82□□□□□ -0.68
USP30-203ENST00000392784 ZSCAN10Q96SZ4 725 aaPredicted RBP10.82□□□□□ -0.68
USP30-203ENST00000392784 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
USP30-203ENST00000392784 RRAGDQ9NQL2 400 aaPredicted RBP10.82□□□□□ -0.68
USP30-203ENST00000392784 MCM9Q9NXL9 1143 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms