RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SDR42E1Q8WUS8 393 aa23.45■■□□□ 1.35
PTPN11-202ENST00000392597 RBSNQ9H1K0 784 aa23.45■■□□□ 1.35
PTPN11-202ENST00000392597 BBOX1O75936 387 aa23.45■■□□□ 1.34
PTPN11-202ENST00000392597 ZNF804AQ7Z570 1209 aa23.45■■□□□ 1.34
PTPN11-202ENST00000392597 TDRD7Q8NHU6 1098 aaKnown RBP23.45■■□□□ 1.34
PTPN11-202ENST00000392597 ANP32BQ92688 251 aaKnown RBP23.45■■□□□ 1.34
PTPN11-202ENST00000392597 TSPY26PQ9H489 355 aa23.45■■□□□ 1.34
PTPN11-202ENST00000392597 INCENPQ9NQS7 918 aa23.45■■□□□ 1.34
PTPN11-202ENST00000392597 TFIP11Q9UBB9 837 aaKnown RBP23.45■■□□□ 1.34
PTPN11-202ENST00000392597 MMP10P09238 476 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 RCAN1P53805 252 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 DDR1Q08345 913 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 CHAF1AQ13111 956 aaPredicted RBP23.44■■□□□ 1.34
PTPN11-202ENST00000392597 NFXL1Q6ZNB6 911 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 C8orf76Q96K31 380 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 ZNF396Q96N95 335 aaPredicted RBP23.44■■□□□ 1.34
PTPN11-202ENST00000392597 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
PTPN11-202ENST00000392597 ADD1P35611 737 aaKnown RBP23.43■■□□□ 1.34
PTPN11-202ENST00000392597 DYNLL1P63167 89 aaKnown RBP23.43■■□□□ 1.34
PTPN11-202ENST00000392597 FBXO18Q8NFZ0 1043 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 CRAMP1Q96RY5 1269 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 CRNKL1Q9BZJ0 848 aaKnown RBP23.43■■□□□ 1.34
PTPN11-202ENST00000392597 SLC12A7Q9Y666 1083 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 NRXN2Q9P2S2 1712 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 GOLGA6L4A6NEF3 574 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 CCDC69A6NI79 296 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 ZBTB7AO95365 584 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 TMC4Q7Z404 712 aa23.43■■□□□ 1.34
PTPN11-202ENST00000392597 ERICH2A1L162 156 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 PRDX5P30044 214 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 SYNE3Q6ZMZ3 975 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 ESR2Q92731 530 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 SENP2Q9HC62 589 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 ATP8A2Q9NTI2 1148 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 PARP3Q9Y6F1 533 aa23.42■■□□□ 1.34
PTPN11-202ENST00000392597 BAZ2AQ9UIF9 1905 aaKnown RBP23.42■■□□□ 1.34
PTPN11-202ENST00000392597 FGRP09769 529 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 TOMM22Q9NS69 142 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 RCOR1Q9UKL0 485 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 GOLGA8AA7E2F4 631 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 MINDY4BA8MYZ0 360 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 GPSM2P81274 684 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 CCDC173Q0VFZ6 552 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 WTAPQ15007 396 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 RRP12Q5JTH9 1297 aaKnown RBP23.41■■□□□ 1.34
PTPN11-202ENST00000392597 MICU3Q86XE3 530 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 RAB11FIP4Q86YS3 637 aa23.41■■□□□ 1.34
PTPN11-202ENST00000392597 LRRC37AA6NMS7 1700 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 STK36Q9NRP7 1315 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 FOSBP53539 338 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 NTRK3Q16288 839 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 BRAPQ7Z569 592 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 DZIP1Q86YF9 867 aaKnown RBP23.4■■□□□ 1.34
PTPN11-202ENST00000392597 LAMB1P07942 1786 aa23.4■■□□□ 1.34
PTPN11-202ENST00000392597 CDC27P30260 824 aa23.39■■□□□ 1.34
PTPN11-202ENST00000392597 PPP1R9BQ96SB3 815 aa23.39■■□□□ 1.34
PTPN11-202ENST00000392597 FAM217BQ9NTX9 383 aaPredicted RBP23.39■■□□□ 1.34
PTPN11-202ENST00000392597 GGA1Q9UJY5 639 aa23.39■■□□□ 1.34
PTPN11-202ENST00000392597 LDHBP07195 334 aaKnown RBP23.39■■□□□ 1.33
PTPN11-202ENST00000392597 GSTO1P78417 241 aa23.39■■□□□ 1.33
PTPN11-202ENST00000392597 GUCY1B3Q02153 619 aa23.39■■□□□ 1.33
PTPN11-202ENST00000392597 CTR9Q6PD62 1173 aa23.39■■□□□ 1.33
PTPN11-202ENST00000392597 UBAC1Q9BSL1 405 aa23.39■■□□□ 1.33
PTPN11-202ENST00000392597 PPFIA3O75145 1194 aa23.38■■□□□ 1.33
PTPN11-202ENST00000392597 UFL1O94874 794 aa23.38■■□□□ 1.33
PTPN11-202ENST00000392597 SBK1Q52WX2 424 aa23.38■■□□□ 1.33
PTPN11-202ENST00000392597 DDX19AQ9NUU7 478 aaKnown RBP23.38■■□□□ 1.33
PTPN11-202ENST00000392597 AATFQ9NY61 560 aaKnown RBP eCLIP23.38■■□□□ 1.33
PTPN11-202ENST00000392597 POLD1P28340 1107 aa23.37■■□□□ 1.33
PTPN11-202ENST00000392597 PGBD1Q96JS3 809 aa23.37■■□□□ 1.33
PTPN11-202ENST00000392597 DCP1AQ9NPI6 582 aaPredicted RBP23.37■■□□□ 1.33
PTPN11-202ENST00000392597 ARPP21Q9UBL0 812 aaPredicted RBP23.37■■□□□ 1.33
PTPN11-202ENST00000392597 ATF5Q9Y2D1 282 aaPredicted RBP23.37■■□□□ 1.33
PTPN11-202ENST00000392597 CCDC196A0A1B0GTZ2 297 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 IL1R1P14778 569 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 IFNAR1P17181 557 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 IARSP41252 1262 aaKnown RBP23.36■■□□□ 1.33
PTPN11-202ENST00000392597 NT5C2P49902 561 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 PPP2R5BQ15173 497 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 SGIP1Q9BQI5 828 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 ALG1Q9BT22 464 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 LTBP1Q14766 1721 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 ANKRD31Q8N7Z5 1873 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 ORC4O43929 436 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 LIG1P18858 919 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 RXRAP19793 462 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 SEC23AQ15436 765 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 CERS3Q8IU89 383 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 USP28Q96RU2 1077 aa23.36■■□□□ 1.33
PTPN11-202ENST00000392597 ECM29Q5VYK3 1845 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 MYH2Q9UKX2 1941 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 USP17L12C9JPN9 530 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 USP17L21D6R901 530 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 SLC3A2P08195 630 aaKnown RBP23.35■■□□□ 1.33
PTPN11-202ENST00000392597 TPRNQ4KMQ1 711 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 WASF1Q92558 559 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 CD209Q9NNX6 404 aa23.35■■□□□ 1.33
PTPN11-202ENST00000392597 RTEL1Q9NZ71 1219 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms