RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 FOXD4L6Q3SYB3 417 aaPredicted RBP25.04■■□□□ 1.6
SPHK1-202ENST00000392496 FOXD4L3Q6VB84 417 aaPredicted RBP25.04■■□□□ 1.6
SPHK1-202ENST00000392496 CERS3Q8IU89 383 aa25.04■■□□□ 1.6
SPHK1-202ENST00000392496 LAMB1P07942 1786 aa25.04■■□□□ 1.6
SPHK1-202ENST00000392496 IFIT3O14879 490 aaKnown RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 BAG3O95817 575 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 FGRP09769 529 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 SART3Q15020 963 aaKnown RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 GRIK5Q16478 980 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 SBK1Q52WX2 424 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 RRP12Q5JTH9 1297 aaKnown RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 DPP8Q6V1X1 898 aaPredicted RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 ZNF622Q969S3 477 aaKnown RBP eCLIP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 SPON1Q9HCB6 807 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 TOMM22Q9NS69 142 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 MROH7-TTC4A0A0A0MT08 1334 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 MBD3O95983 291 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 ESR2Q92731 530 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 NOL10Q9BSC4 688 aaKnown RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 ZC3H12CQ9C0D7 883 aaKnown RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 ARPP21Q9UBL0 812 aaPredicted RBP25.03■■□□□ 1.6
SPHK1-202ENST00000392496 MYH2Q9UKX2 1941 aa25.03■■□□□ 1.6
SPHK1-202ENST00000392496 USP17L12C9JPN9 530 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 USP17L21D6R901 530 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 H3BQV1 296 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 IFFO2Q5TF58 517 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 APOA5Q6Q788 366 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 CNPY2Q9Y2B0 182 aa25.02■■□□□ 1.6
SPHK1-202ENST00000392496 ATF5Q9Y2D1 282 aaPredicted RBP25.02■■□□□ 1.6
SPHK1-202ENST00000392496 CSPP1Q1MSJ5 1256 aa25.01■■□□□ 1.59
SPHK1-202ENST00000392496 USP48Q86UV5 1035 aa25.01■■□□□ 1.59
SPHK1-202ENST00000392496 TMTC2Q8N394 836 aa25.01■■□□□ 1.59
SPHK1-202ENST00000392496 METAP2P50579 478 aaKnown RBP eCLIP25■■□□□ 1.59
SPHK1-202ENST00000392496 DIXDC1Q155Q3 683 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 MFSD14BQ5SR56 506 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 NFXL1Q6ZNB6 911 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 SLF2Q8IX21 1173 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 GPT2Q8TD30 523 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 ERICH2A1L162 156 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 CPLX1O14810 134 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 RIMBP2O15034 1052 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 ZBTB43O43298 467 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 OLFM4Q6UX06 510 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 FAM163AQ96GL9 167 aaPredicted RBP25■■□□□ 1.59
SPHK1-202ENST00000392496 EYA3Q99504 573 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 RTFDC1Q9BY42 306 aaPredicted RBP25■■□□□ 1.59
SPHK1-202ENST00000392496 SENP2Q9HC62 589 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 SUGT1Q9Y2Z0 365 aa25■■□□□ 1.59
SPHK1-202ENST00000392496 NID2Q14112 1375 aa24.99■■□□□ 1.59
SPHK1-202ENST00000392496 CYP2D7A0A087X1C5 515 aa24.99■■□□□ 1.59
SPHK1-202ENST00000392496 CCDC69A6NI79 296 aa24.99■■□□□ 1.59
SPHK1-202ENST00000392496 SLC3A2P08195 630 aaKnown RBP24.99■■□□□ 1.59
SPHK1-202ENST00000392496 FDPSP14324 419 aaKnown RBP24.99■■□□□ 1.59
SPHK1-202ENST00000392496 DNM1Q05193 864 aaKnown RBP24.99■■□□□ 1.59
SPHK1-202ENST00000392496 CNKSR1Q969H4 720 aa24.99■■□□□ 1.59
SPHK1-202ENST00000392496 ZSCAN16Q9H4T2 348 aaPredicted RBP24.99■■□□□ 1.59
SPHK1-202ENST00000392496 NCLP19338 710 aaKnown RBP24.98■■□□□ 1.59
SPHK1-202ENST00000392496 WTAPQ15007 396 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 FERMT3Q86UX7 667 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 STK11IPQ8N1F8 1099 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 GDPD2Q9HCC8 539 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 MKRN1Q9UHC7 482 aaKnown RBP24.98■■□□□ 1.59
SPHK1-202ENST00000392496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.98■■□□□ 1.59
SPHK1-202ENST00000392496 SLC12A7Q9Y666 1083 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 GPR75-ASB3A0A0A6YYF3 556 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 ORC4O43929 436 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 CDKL5O76039 1030 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 RCAN1P53805 252 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 RESTQ13127 1097 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 CPLX2Q6PUV4 134 aaKnown RBP24.98■■□□□ 1.59
SPHK1-202ENST00000392496 SYNE3Q6ZMZ3 975 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 RGS22Q8NE09 1264 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 SH3RF3Q8TEJ3 882 aaPredicted RBP24.98■■□□□ 1.59
SPHK1-202ENST00000392496 UBAC1Q9BSL1 405 aa24.98■■□□□ 1.59
SPHK1-202ENST00000392496 USP5P45974 858 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 NT5C2P49902 561 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 GTF2IP78347 998 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 KRT85P78386 507 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 RAB11FIP4Q86YS3 637 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 SLX4Q8IY92 1834 aa24.97■■□□□ 1.59
SPHK1-202ENST00000392496 SMIM22K7EJ46 135 aa24.96■■□□□ 1.59
SPHK1-202ENST00000392496 PLCG2P16885 1265 aa24.96■■□□□ 1.59
SPHK1-202ENST00000392496 ORC3Q9UBD5 711 aaPredicted RBP24.96■■□□□ 1.59
SPHK1-202ENST00000392496 GAKO14976 1311 aa24.96■■□□□ 1.59
SPHK1-202ENST00000392496 GOLGA8AA7E2F4 631 aa24.95■■□□□ 1.59
SPHK1-202ENST00000392496 BTDP43251 543 aa24.95■■□□□ 1.59
SPHK1-202ENST00000392496 MICU3Q86XE3 530 aa24.95■■□□□ 1.59
SPHK1-202ENST00000392496 ZKSCAN3Q9BRR0 538 aa24.95■■□□□ 1.59
SPHK1-202ENST00000392496 MCM9Q9NXL9 1143 aa24.95■■□□□ 1.59
SPHK1-202ENST00000392496 ISY1Q9ULR0 285 aaKnown RBP24.95■■□□□ 1.59
SPHK1-202ENST00000392496 NAV1Q8NEY1 1877 aa24.95■■□□□ 1.58
SPHK1-202ENST00000392496 FIBPO43427 364 aa24.95■■□□□ 1.58
SPHK1-202ENST00000392496 SEC23AQ15436 765 aa24.95■■□□□ 1.58
SPHK1-202ENST00000392496 CAVIN1Q6NZI2 390 aaKnown RBP24.95■■□□□ 1.58
SPHK1-202ENST00000392496 CHRNA5P30532 468 aa24.94■■□□□ 1.58
SPHK1-202ENST00000392496 ADD1P35611 737 aaKnown RBP24.94■■□□□ 1.58
SPHK1-202ENST00000392496 C12orf60Q5U649 245 aa24.94■■□□□ 1.58
SPHK1-202ENST00000392496 DLEC1Q9Y238 1755 aa24.94■■□□□ 1.58
SPHK1-202ENST00000392496 FSD2A1L4K1 749 aa24.93■■□□□ 1.58
SPHK1-202ENST00000392496 GADD45BO75293 160 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms