RNA–Protein interactions for RNA: ENST00000392001.6

RAB17-202, Transcript of RAB17, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB17, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB17-202ENST00000392001 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
RAB17-202ENST00000392001 TACC3Q9Y6A5 838 aa18.35■□□□□ 0.53
RAB17-202ENST00000392001 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
RAB17-202ENST00000392001 TRDNQ13061 729 aa18.35■□□□□ 0.53
RAB17-202ENST00000392001 AGXT2Q9BYV1 514 aa18.35■□□□□ 0.53
RAB17-202ENST00000392001 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 FGRP09769 529 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
RAB17-202ENST00000392001 MFSD6Q6ZSS7 791 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 TCEANC2Q96MN5 208 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 RNF41Q9H4P4 317 aaPredicted RBP18.34■□□□□ 0.53
RAB17-202ENST00000392001 CNNM2Q9H8M5 875 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 WDR19Q8NEZ3 1342 aa18.34■□□□□ 0.53
RAB17-202ENST00000392001 MCM5P33992 734 aa18.33■□□□□ 0.53
RAB17-202ENST00000392001 CIAPIN1Q6FI81 312 aa18.33■□□□□ 0.53
RAB17-202ENST00000392001 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.53
RAB17-202ENST00000392001 RALYLQ86SE5 291 aaKnown RBP18.33■□□□□ 0.53
RAB17-202ENST00000392001 INCENPQ9NQS7 918 aa18.33■□□□□ 0.53
RAB17-202ENST00000392001 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.53
RAB17-202ENST00000392001 ADAMTSL1Q8N6G6 1762 aa18.33■□□□□ 0.52
RAB17-202ENST00000392001 CYP2D7A0A087X1C5 515 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 FZD9O00144 591 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 USP17L8P0C7I0 530 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 PCP11498 1178 aaKnown RBP18.32■□□□□ 0.52
RAB17-202ENST00000392001 CUL4AQ13619 759 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 TNIP1Q15025 636 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 Q6ZUG5 572 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 KRT23Q9C075 422 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 USP40Q9NVE5 1235 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 FLT1P17948 1338 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 NEDD4P46934 1319 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 FOCADQ5VW36 1801 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 SMIM22K7EJ46 135 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 WDHD1O75717 1129 aaPredicted RBP18.32■□□□□ 0.52
RAB17-202ENST00000392001 ANTXR2P58335 489 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 ARHGAP27Q6ZUM4 889 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 MAPKAPK5Q8IW41 473 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 NKX2-3Q8TAU0 364 aa18.32■□□□□ 0.52
RAB17-202ENST00000392001 ZSCAN31Q96LW9 406 aaPredicted RBP18.32■□□□□ 0.52
RAB17-202ENST00000392001 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
RAB17-202ENST00000392001 UTRNP46939 3433 aa18.31■□□□□ 0.52
RAB17-202ENST00000392001 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
RAB17-202ENST00000392001 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
RAB17-202ENST00000392001 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
RAB17-202ENST00000392001 B4E1Z4 1266 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 PRC1O43663 620 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 CYP2D6P10635 497 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 MMP14P50281 582 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 CFAP100Q494V2 611 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 CHST3Q7LGC8 479 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 OGFOD1Q8N543 542 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
RAB17-202ENST00000392001 ZSWIM5Q9P217 1185 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 LAMB1P07942 1786 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
RAB17-202ENST00000392001 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 ROBO3Q96MS0 1386 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 LMNB1P20700 586 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.523e-8■□□□□ 9.7
RAB17-202ENST00000392001 EVX2Q03828 476 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 CYB5R4Q7L1T6 521 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 LRRC2Q9BYS8 371 aa18.3■□□□□ 0.52
RAB17-202ENST00000392001 SH2B1Q9NRF2 756 aaPredicted RBP18.3■□□□□ 0.52
RAB17-202ENST00000392001 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
RAB17-202ENST00000392001 NPM3O75607 178 aaKnown RBP18.29■□□□□ 0.52
RAB17-202ENST00000392001 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
RAB17-202ENST00000392001 SLC3A2P08195 630 aaKnown RBP18.29■□□□□ 0.52
RAB17-202ENST00000392001 EVCP57679 992 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 ME3Q16798 604 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 AMOTL1Q8IY63 956 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 MTMR14Q8NCE2 650 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 INTS4Q96HW7 963 aaKnown RBP18.29■□□□□ 0.52
RAB17-202ENST00000392001 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 DDX4Q9NQI0 724 aaKnown RBP18.29■□□□□ 0.52
RAB17-202ENST00000392001 ECM29Q5VYK3 1845 aa18.29■□□□□ 0.52
RAB17-202ENST00000392001 ORC4O43929 436 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 KDM4AO75164 1064 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 RPS12P25398 132 aaKnown RBP18.28■□□□□ 0.52
RAB17-202ENST00000392001 DDIT3P35638 169 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 PLCD1P51178 756 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
RAB17-202ENST00000392001 BRF1Q92994 677 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 PRMT6Q96LA8 375 aaPredicted RBP18.28■□□□□ 0.52
RAB17-202ENST00000392001 MTA3Q9BTC8 594 aa18.28■□□□□ 0.52
RAB17-202ENST00000392001 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 LARGE1O95461 756 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
RAB17-202ENST00000392001 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 NT5C2P49902 561 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 FGD1P98174 961 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 IGDCC4Q8TDY8 1250 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 ESR2Q92731 530 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
RAB17-202ENST00000392001 SAP30BPQ9UHR5 308 aaKnown RBP18.27■□□□□ 0.52
RAB17-202ENST00000392001 DICER1Q9UPY3 1922 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms