RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 SLC52A2Q9HAB3 445 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 NFE2L3Q9Y4A8 694 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 USP19O94966 1318 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 LRMPQ12912 555 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 INTS8Q75QN2 995 aaKnown RBP12.86□□□□□ -0.35
RPH3A-201ENST00000389385 LMNTD2Q8IXW0 634 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 VPS16Q9H269 839 aa12.86□□□□□ -0.35
RPH3A-201ENST00000389385 ARHGEF10O15013 1369 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 BAG3O95817 575 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 IFT20Q8IY31 132 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 LRRC45Q96CN5 670 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 PLEKHG1Q9ULL1 1385 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 SLC27A2O14975 620 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 ZNF202O95125 648 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 KRT2P35908 639 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 TFCP2Q12800 502 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 EHMT1Q9H9B1 1298 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 CALM1P0DP23 149 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 CALM2P0DP24 149 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 CALM3P0DP25 149 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 PCK1P35558 622 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 PPP1R2P41236 205 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 KIAA1524Q8TCG1 905 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 XPO4Q9C0E2 1151 aaKnown RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 NKIRAS1Q9NYS0 192 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 KRT9P35527 623 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 ATP11AP98196 1134 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 PLBD2Q8NHP8 589 aa12.85□□□□□ -0.35
RPH3A-201ENST00000389385 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
RPH3A-201ENST00000389385 ZNF772Q68DY9 489 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 KDM5CP41229 1560 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 CYP7A1P22680 504 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 ST5P78524 1137 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 JAKMIP2Q96AA8 810 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 A1BGP04217 495 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
RPH3A-201ENST00000389385 PNMA8AQ86V59 439 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-201ENST00000389385 EFCAB8A8MWE9 144 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 CUTAO60888 179 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 TPTE2Q6XPS3 522 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 IL17REQ8NFR9 667 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 GPT2Q8TD30 523 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.35
RPH3A-201ENST00000389385 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 TM6SF1Q9BZW5 370 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 MTUS1Q9ULD2 1270 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.35
RPH3A-201ENST00000389385 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.35
RPH3A-201ENST00000389385 FERP16591 822 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 MTX1Q13505 466 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 HEATR3Q7Z4Q2 680 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 SREK1Q8WXA9 508 aaKnown RBP12.83□□□□□ -0.36
RPH3A-201ENST00000389385 MRFAP1L1Q96HT8 127 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 TSNARE1Q96NA8 513 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 PAK2Q13177 524 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 USP37Q86T82 979 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
RPH3A-201ENST00000389385 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
RPH3A-201ENST00000389385 MYCBPQ99417 103 aaPredicted RBP12.83□□□□□ -0.36
RPH3A-201ENST00000389385 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 STMN2Q93045 179 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 SEC62Q99442 399 aaKnown RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 GOLGA5Q8TBA6 731 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 SECISBP2LQ93073 1101 aaKnown RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 NOC4LQ9BVI4 516 aaKnown RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 TSPOAP1O95153 1857 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 RXRAP19793 462 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 ATP5DP30049 168 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 CROCCP2Q86T23 111 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 CACNA2D3Q8IZS8 1091 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 NAP1L3Q99457 506 aaPredicted RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 FEZ2Q9UHY8 353 aaPredicted RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
RPH3A-201ENST00000389385 ACTN4O43707 911 aaKnown RBP12.82□□□□□ -0.36
RPH3A-201ENST00000389385 MCM7P33993 719 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms