RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 SALL2Q9Y467 1007 aaPredicted RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
IFT88-203ENST00000389373 LRRFIP2Q9Y608 721 aaKnown RBP12.14□□□□□ -0.47
IFT88-203ENST00000389373 TRIM75PA6NK02 468 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 PDE8BO95263 885 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
IFT88-203ENST00000389373 PTPRAP18433 802 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 EXOSC9Q06265 439 aaKnown RBP12.13□□□□□ -0.47
IFT88-203ENST00000389373 TRIM32Q13049 653 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 WDR66Q8TBY9 1149 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 SRCIN1Q9C0H9 1055 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
IFT88-203ENST00000389373 COL6A3P12111 3177 aa12.12□□□□□ -0.47
IFT88-203ENST00000389373 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
IFT88-203ENST00000389373 SLURP2P0DP57 97 aa12.12□□□□□ -0.47
IFT88-203ENST00000389373 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
IFT88-203ENST00000389373 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
IFT88-203ENST00000389373 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
IFT88-203ENST00000389373 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
IFT88-203ENST00000389373 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
IFT88-203ENST00000389373 MGAMO43451 1857 aa12.12□□□□□ -0.47
IFT88-203ENST00000389373 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 HMGCRP04035 888 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
IFT88-203ENST00000389373 PRDX5P30044 214 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 KAZALD1Q96I82 304 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
IFT88-203ENST00000389373 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
IFT88-203ENST00000389373 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
IFT88-203ENST00000389373 LDHBP07195 334 aaKnown RBP12.1□□□□□ -0.47
IFT88-203ENST00000389373 RGS3P49796 1198 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 TREML2Q5T2D2 321 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 VGLL2Q8N8G2 317 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 AGTPBP1Q9UPW5 1226 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 IL16Q14005 1332 aa12.1□□□□□ -0.47
IFT88-203ENST00000389373 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
IFT88-203ENST00000389373 SLC5A1P13866 664 aa12.09□□□□□ -0.47
IFT88-203ENST00000389373 CYP2B6P20813 491 aa12.09□□□□□ -0.47
IFT88-203ENST00000389373 PICALMQ13492 652 aa12.09□□□□□ -0.47
IFT88-203ENST00000389373 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
IFT88-203ENST00000389373 FAM110CQ1W6H9 321 aa12.09□□□□□ -0.47
IFT88-203ENST00000389373 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
IFT88-203ENST00000389373 FGFR2P21802 821 aa12.08□□□□□ -0.48
IFT88-203ENST00000389373 GUCD1Q96NT3 240 aa12.08□□□□□ -0.48
IFT88-203ENST00000389373 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
IFT88-203ENST00000389373 DDTLA6NHG4 134 aaPredicted RBP12.07□□□□□ -0.48
IFT88-203ENST00000389373 ENTPD3O75355 529 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 GCLCP48506 637 aaPredicted RBP12.07□□□□□ -0.48
IFT88-203ENST00000389373 SPP2Q13103 211 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 SH3BP5LQ7L8J4 393 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 ANKRD44Q8N8A2 993 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 TRIB2Q92519 343 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 LPIN2Q92539 896 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 GJD2Q9UKL4 321 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 PFASO15067 1338 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 A0A0C4DFX4 3053 aa12.07□□□□□ -0.48
IFT88-203ENST00000389373 FAM196BA6NMK8 535 aa12.06□□□□□ -0.48
IFT88-203ENST00000389373 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
IFT88-203ENST00000389373 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
IFT88-203ENST00000389373 PABPC4Q13310 644 aaKnown RBP eCLIP12.06□□□□□ -0.48
IFT88-203ENST00000389373 LRRC26Q2I0M4 334 aa12.06□□□□□ -0.48
IFT88-203ENST00000389373 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
IFT88-203ENST00000389373 LBHD1Q9BQE6 289 aaPredicted RBP12.06□□□□□ -0.48
IFT88-203ENST00000389373 IDI2Q9BXS1 227 aa12.06□□□□□ -0.48
IFT88-203ENST00000389373 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.06□□□□□ -0.48
IFT88-203ENST00000389373 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
IFT88-203ENST00000389373 ATRNL1Q5VV63 1379 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 HMGCS2P54868 508 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 RABL6Q3YEC7 729 aaPredicted RBP12.05□□□□□ -0.48
IFT88-203ENST00000389373 CCDC184Q52MB2 194 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 FAM109BQ6ICB4 259 aaPredicted RBP12.05□□□□□ -0.48
IFT88-203ENST00000389373 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
IFT88-203ENST00000389373 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 ASCC2Q9H1I8 757 aaPredicted RBP12.05□□□□□ -0.48
IFT88-203ENST00000389373 DDX4Q9NQI0 724 aaKnown RBP12.05□□□□□ -0.48
IFT88-203ENST00000389373 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
IFT88-203ENST00000389373 DDX60LQ5H9U9 1706 aaKnown RBP12.04□□□□□ -0.48
IFT88-203ENST00000389373 EYA2O00167 538 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 PEX10O60683 326 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 CACNB2Q08289 660 aaPredicted RBP12.04□□□□□ -0.48
IFT88-203ENST00000389373 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
IFT88-203ENST00000389373 CCAR1Q8IX12 1150 aaKnown RBP12.04□□□□□ -0.48
IFT88-203ENST00000389373 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
IFT88-203ENST00000389373 SIL1Q9H173 461 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 ABCF2Q9UG63 623 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 UTYO14607 1347 aa12.04□□□□□ -0.48
IFT88-203ENST00000389373 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
IFT88-203ENST00000389373 CCND3P30281 292 aaPredicted RBP12.03□□□□□ -0.48
IFT88-203ENST00000389373 BTDP43251 543 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 PHKA1P46020 1223 aa12.03□□□□□ -0.48
IFT88-203ENST00000389373 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms