RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 DBNLQ9UJU6 430 aaKnown RBP22.33■■□□□ 1.17
CD9-204ENST00000382519 DDX4Q9NQI0 724 aaKnown RBP22.32■■□□□ 1.16
CD9-204ENST00000382519 IRF6O14896 467 aa22.31■■□□□ 1.16
CD9-204ENST00000382519 PPIL2Q13356 520 aa22.31■■□□□ 1.16
CD9-204ENST00000382519 EAF2Q96CJ1 260 aaPredicted RBP22.31■■□□□ 1.16
CD9-204ENST00000382519 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
CD9-204ENST00000382519 DOCK1Q14185 1865 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 CDK5RAP2Q96SN8 1893 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 ATRNL1Q5VV63 1379 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 CETPP11597 493 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 RHBDL3P58872 404 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 SNAPC2Q13487 334 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 HSP90AB4PQ58FF6 505 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 SH3BP5LQ7L8J4 393 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 ZNF112Q9UJU3 913 aa22.3■■□□□ 1.16
CD9-204ENST00000382519 DDTLA6NHG4 134 aaPredicted RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 HMMRO75330 724 aa22.29■■□□□ 1.16
CD9-204ENST00000382519 ZAP70P43403 619 aa22.29■■□□□ 1.16
CD9-204ENST00000382519 PPATQ06203 517 aa22.29■■□□□ 1.16
CD9-204ENST00000382519 TAF1CQ15572 869 aaPredicted RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 PKN2Q16513 984 aaKnown RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 NAA16Q6N069 864 aaPredicted RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 AACSQ86V21 672 aa22.29■■□□□ 1.16
CD9-204ENST00000382519 ZNF512BQ96KM6 892 aaPredicted RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 CHMP4BQ9H444 224 aaKnown RBP22.29■■□□□ 1.16
CD9-204ENST00000382519 ZBTB40Q9NUA8 1239 aa22.29■■□□□ 1.16
CD9-204ENST00000382519 APBB1O00213 710 aa22.28■■□□□ 1.16
CD9-204ENST00000382519 CYP2E1P05181 493 aaPredicted RBP22.28■■□□□ 1.16
CD9-204ENST00000382519 NOL9Q5SY16 702 aaKnown RBP22.28■■□□□ 1.16
CD9-204ENST00000382519 RPAP2Q8IXW5 612 aaPredicted RBP22.28■■□□□ 1.16
CD9-204ENST00000382519 FAM43AQ8N2R8 423 aa22.28■■□□□ 1.16
CD9-204ENST00000382519 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.28■■□□□ 1.16
CD9-204ENST00000382519 IL1RAPL2Q9NP60 686 aa22.28■■□□□ 1.16
CD9-204ENST00000382519 FOCADQ5VW36 1801 aa22.27■■□□□ 1.16
CD9-204ENST00000382519 MAP4K4O95819 1239 aaPredicted RBP22.27■■□□□ 1.16
CD9-204ENST00000382519 TEX11Q8IYF3 940 aa22.27■■□□□ 1.16
CD9-204ENST00000382519 ZFYVE28Q9HCC9 887 aa22.27■■□□□ 1.16
CD9-204ENST00000382519 HPS5Q9UPZ3 1129 aa22.27■■□□□ 1.16
CD9-204ENST00000382519 C20orf194Q5TEA3 1177 aa22.26■■□□□ 1.15
CD9-204ENST00000382519 RHPN1Q8TCX5 695 aa22.26■■□□□ 1.15
CD9-204ENST00000382519 SH3RF3Q8TEJ3 882 aaPredicted RBP22.26■■□□□ 1.15
CD9-204ENST00000382519 ERO1AQ96HE7 468 aa22.26■■□□□ 1.15
CD9-204ENST00000382519 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
CD9-204ENST00000382519 PIH1D3Q9NQM4 214 aaKnown RBP22.26■■□□□ 1.15
CD9-204ENST00000382519 AATFQ9NY61 560 aaKnown RBP eCLIP22.26■■□□□ 1.15
CD9-204ENST00000382519 ATAD5Q96QE3 1844 aa22.26■■□□□ 1.15
CD9-204ENST00000382519 BTBD19C9JJ37 291 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 BAG3O95817 575 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 SLURP2P0DP57 97 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 FBXO46Q6PJ61 603 aaPredicted RBP22.25■■□□□ 1.15
CD9-204ENST00000382519 SCYL3Q8IZE3 742 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 CD99L2Q8TCZ2 262 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 PICK1Q9NRD5 415 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 TRIM17Q9Y577 477 aa22.25■■□□□ 1.15
CD9-204ENST00000382519 COL2A1P02458 1487 aaPredicted RBP22.25■■□□□ 1.15
CD9-204ENST00000382519 PHF20L1A8MW92 1017 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 NPM3O75607 178 aaKnown RBP22.24■■□□□ 1.15
CD9-204ENST00000382519 IDH1O75874 414 aaKnown RBP22.24■■□□□ 1.15
CD9-204ENST00000382519 PLCG2P16885 1265 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 SP3Q02447 781 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 PDE3AQ14432 1141 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 ADGRA1Q86SQ6 560 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 SIRT2Q8IXJ6 389 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 KIF1BPQ96EK5 621 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 OSBPL5Q9H0X9 879 aaPredicted RBP22.24■■□□□ 1.15
CD9-204ENST00000382519 NDUFB9Q9Y6M9 179 aa22.24■■□□□ 1.15
CD9-204ENST00000382519 PHIPQ8WWQ0 1821 aa22.23■■□□□ 1.15
CD9-204ENST00000382519 FAM196BA6NMK8 535 aa22.23■■□□□ 1.15
CD9-204ENST00000382519 CLASRPQ8N2M8 674 aaKnown RBP22.23■■□□□ 1.15
CD9-204ENST00000382519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.23■■□□□ 1.15
CD9-204ENST00000382519 ZCCHC17Q9NP64 241 aaKnown RBP22.23■■□□□ 1.15
CD9-204ENST00000382519 KCNH4Q9UQ05 1017 aa22.23■■□□□ 1.15
CD9-204ENST00000382519 PTPRFP10586 1907 aa22.23■■□□□ 1.15
CD9-204ENST00000382519 SIPA1L1O43166 1804 aa22.22■■□□□ 1.15
CD9-204ENST00000382519 SOX10P56693 466 aa22.22■■□□□ 1.15
CD9-204ENST00000382519 OTOP1Q7RTM1 612 aa22.22■■□□□ 1.15
CD9-204ENST00000382519 CYP7A1P22680 504 aa22.21■■□□□ 1.15
CD9-204ENST00000382519 MAP3K10Q02779 954 aa22.21■■□□□ 1.15
CD9-204ENST00000382519 ZSWIM8A7E2V4 1837 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 CTNND1O60716 968 aaKnown RBP22.2■■□□□ 1.14
CD9-204ENST00000382519 IGSF3O75054 1194 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 IFIT2P09913 472 aaKnown RBP22.2■■□□□ 1.14
CD9-204ENST00000382519 PTPRAP18433 802 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 ANKRD23Q86SG2 305 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 MAPKAPK5Q8IW41 473 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 TGFBRAP1Q8WUH2 860 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 ANTXR1Q9H6X2 564 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 ZHX2Q9Y6X8 837 aa22.2■■□□□ 1.14
CD9-204ENST00000382519 MYH1P12882 1939 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 TBC1D12O60347 775 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 RAB11FIP3O75154 756 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 PPP4CP60510 307 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 MLLT1Q03111 559 aaPredicted RBP22.19■■□□□ 1.14
CD9-204ENST00000382519 MAGEB6Q8N7X4 407 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 EFCC1Q9HA90 598 aa22.19■■□□□ 1.14
CD9-204ENST00000382519 FLT1P17948 1338 aa22.18■■□□□ 1.14
CD9-204ENST00000382519 PDHXO00330 501 aa22.18■■□□□ 1.14
CD9-204ENST00000382519 CXCL11O14625 94 aa22.18■■□□□ 1.14
CD9-204ENST00000382519 TLR2O60603 784 aa22.18■■□□□ 1.14
CD9-204ENST00000382519 RGS19P49795 217 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms