RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 CPA4Q9UI42 421 aa9.5□□□□□ -0.89
FAM49A-201ENST00000381323 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
FAM49A-201ENST00000381323 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
FAM49A-201ENST00000381323 FCGRTP55899 365 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 PPIL2Q13356 520 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
FAM49A-201ENST00000381323 FPGT-TNNI3KV9GXZ4 949 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
FAM49A-201ENST00000381323 MECOMQ03112 1051 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 ATG9AQ7Z3C6 839 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 ZSCAN25Q6NSZ9 544 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 MIGA1Q8NAN2 632 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 IVNS1ABPQ9Y6Y0 642 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 COL1A1P02452 1464 aaPredicted RBP9.49□□□□□ -0.89
FAM49A-201ENST00000381323 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 IRF6O14896 467 aa9.49□□□□□ -0.89
FAM49A-201ENST00000381323 DHX36Q9H2U1 1008 aaKnown RBP9.49□□□□□ -0.89
FAM49A-201ENST00000381323 PDHXO00330 501 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 APOBEC3HQ6NTF7 200 aaKnown RBP9.48□□□□□ -0.89
FAM49A-201ENST00000381323 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
FAM49A-201ENST00000381323 MAGEB6Q8N7X4 407 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 HMG20BQ9P0W2 317 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 MROH7-TTC4A0A0A0MT08 1334 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 PSMC4P43686 418 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 RAB3GAP1Q15042 981 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 DPF3Q92784 378 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 PI4KBQ9UBF8 816 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 GLRX3O76003 335 aaKnown RBP9.48□□□□□ -0.89
FAM49A-201ENST00000381323 FGFR2P21802 821 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 NFIAQ12857 509 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 SCYL3Q8IZE3 742 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 PAGR1Q9BTK6 254 aa9.48□□□□□ -0.89
FAM49A-201ENST00000381323 SPP2Q13103 211 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 CXCL11O14625 94 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 ZYXQ15942 572 aaKnown RBP9.47□□□□□ -0.89
FAM49A-201ENST00000381323 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.47□□□□□ -0.89
FAM49A-201ENST00000381323 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
FAM49A-201ENST00000381323 RFX5P48382 616 aaPredicted RBP9.47□□□□□ -0.89
FAM49A-201ENST00000381323 GRIK5Q16478 980 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 ASNSP08243 561 aa9.47□□□□□ -0.89
FAM49A-201ENST00000381323 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.47□□□□□ -0.89
FAM49A-201ENST00000381323 MAGEB6P1A0A0J9YX57 407 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 USP17L5A8MUK1 530 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.89
FAM49A-201ENST00000381323 GOLIM4O00461 696 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 CTNND1O60716 968 aaKnown RBP9.46□□□□□ -0.89
FAM49A-201ENST00000381323 MAP3K11Q16584 847 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 TNNQ9UQP3 1299 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 ZAP70P43403 619 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 SLC9C2Q5TAH2 1124 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 PI16Q6UXB8 463 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 OTOP1Q7RTM1 612 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 BRI3BPQ8WY22 251 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.89
FAM49A-201ENST00000381323 FAM196BA6NMK8 535 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 RAB11FIP3O75154 756 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 MCM9Q9NXL9 1143 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 CASP8AP2Q9UKL3 1982 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 BTBD19C9JJ37 291 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 CCNA1P78396 465 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 IKQ13123 557 aaPredicted RBP9.46□□□□□ -0.9
FAM49A-201ENST00000381323 FOXP4Q8IVH2 680 aaPredicted RBP9.46□□□□□ -0.9
FAM49A-201ENST00000381323 VGLL2Q8N8G2 317 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 ZBED3Q96IU2 234 aaPredicted RBP9.46□□□□□ -0.9
FAM49A-201ENST00000381323 BOLA2Q9H3K6 86 aa9.46□□□□□ -0.9
FAM49A-201ENST00000381323 AK9Q5TCS8 1911 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 PRMT2P55345 433 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 RNF208Q9H0X6 261 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 GPR108Q9NPR9 543 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
FAM49A-201ENST00000381323 CDAN1Q8IWY9 1227 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 RHPN1Q8TCX5 695 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 LRRCC1Q9C099 1032 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 KIAA0100Q14667 2235 aaKnown RBP9.45□□□□□ -0.9
FAM49A-201ENST00000381323 SLC3A2P08195 630 aaKnown RBP9.45□□□□□ -0.9
FAM49A-201ENST00000381323 NKX2-3Q8TAU0 364 aa9.45□□□□□ -0.9
FAM49A-201ENST00000381323 ERC2O15083 957 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 TLR2O60603 784 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 TFRCP02786 760 aaKnown RBP9.44□□□□□ -0.9
FAM49A-201ENST00000381323 HMGCS2P54868 508 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 PLS1Q14651 629 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 TRMT2AQ8IZ69 625 aaKnown RBP9.44□□□□□ -0.9
FAM49A-201ENST00000381323 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 NR2E3Q9Y5X4 410 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 MYPNQ86TC9 1320 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
FAM49A-201ENST00000381323 MTX1Q13505 466 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 FAM43AQ8N2R8 423 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 MKNK2Q9HBH9 465 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 GDF11O95390 407 aa9.44□□□□□ -0.9
FAM49A-201ENST00000381323 GNRH1P01148 92 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms