RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 HHIPL2Q6UWX4 724 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 TGFBRAP1Q8WUH2 860 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 MRIQ9BWK5 157 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 GPHNQ9NQX3 736 aaPredicted RBP23.17■■□□□ 1.3
CCM2-202ENST00000381112 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.17■■□□□ 1.3
CCM2-202ENST00000381112 SCN9AQ15858 1988 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 BRCA1P38398 1863 aaKnown RBP23.17■■□□□ 1.3
CCM2-202ENST00000381112 FGRP09769 529 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 SCNN1DP51172 638 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 APOBRQ0VD83 1088 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 TEX11Q8IYF3 940 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 TEKT1Q969V4 418 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 MCM9Q9NXL9 1143 aa23.17■■□□□ 1.3
CCM2-202ENST00000381112 COL4A5P29400 1685 aa23.16■■□□□ 1.3
CCM2-202ENST00000381112 ZSWIM5Q9P217 1185 aa23.16■■□□□ 1.3
CCM2-202ENST00000381112 KDM4AO75164 1064 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 USP17L8P0C7I0 530 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 CYP2D6P10635 497 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 PCP11498 1178 aaKnown RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 IARSP41252 1262 aaKnown RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 HDLBPQ00341 1268 aaKnown RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 TAOK3Q9H2K8 898 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 BCS1LQ9Y276 419 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 ZNF646O15015 1829 aaPredicted RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 GOLGB1Q14789 3259 aaKnown RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 EVX2Q03828 476 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 ILDR2Q71H61 639 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 ZNF274Q96GC6 653 aaPredicted RBP23.15■■□□□ 1.3
CCM2-202ENST00000381112 TMEM87BQ96K49 555 aa23.15■■□□□ 1.3
CCM2-202ENST00000381112 NFKBIEO00221 500 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 PFKFB2O60825 505 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 CRKP46108 304 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 STK3Q13188 491 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 RAB3GAP1Q15042 981 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 RRP12Q5JTH9 1297 aaKnown RBP23.14■■□□□ 1.29
CCM2-202ENST00000381112 C12orf60Q5U649 245 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 APOBEC3HQ6NTF7 200 aaKnown RBP23.14■■□□□ 1.29
CCM2-202ENST00000381112 MAPKAPK5Q8IW41 473 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 ZDHHC15Q96MV8 337 aa23.14■■□□□ 1.29
CCM2-202ENST00000381112 SH2B2O14492 632 aaPredicted RBP23.13■■□□□ 1.29
CCM2-202ENST00000381112 IGDCC4Q8TDY8 1250 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 ZNRF3Q9ULT6 936 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 ANGEL1Q9UNK9 670 aaKnown RBP23.13■■□□□ 1.29
CCM2-202ENST00000381112 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.13■■□□□ 1.29
CCM2-202ENST00000381112 FLT1P17948 1338 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 NUCB2P80303 420 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 NIM1KQ8IY84 436 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 TOMM22Q9NS69 142 aa23.13■■□□□ 1.29
CCM2-202ENST00000381112 SLC3A2P08195 630 aaKnown RBP23.12■■□□□ 1.29
CCM2-202ENST00000381112 PDIA3P30101 505 aaKnown RBP23.12■■□□□ 1.29
CCM2-202ENST00000381112 ESR2Q92731 530 aa23.12■■□□□ 1.29
CCM2-202ENST00000381112 MTA3Q9BTC8 594 aa23.12■■□□□ 1.29
CCM2-202ENST00000381112 SERPINA10Q9UK55 444 aa23.12■■□□□ 1.29
CCM2-202ENST00000381112 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
CCM2-202ENST00000381112 SMC3Q9UQE7 1217 aa23.12■■□□□ 1.29
CCM2-202ENST00000381112 BAZ2AQ9UIF9 1905 aaKnown RBP23.12■■□□□ 1.29
CCM2-202ENST00000381112 ORC4O43929 436 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 VIL1P09327 827 aaKnown RBP23.11■■□□□ 1.29
CCM2-202ENST00000381112 SCRN1Q12765 414 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 PKP1Q13835 747 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 RSBN1LQ6PCB5 846 aaPredicted RBP23.11■■□□□ 1.29
CCM2-202ENST00000381112 USP40Q9NVE5 1235 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 ROBO3Q96MS0 1386 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 RAD17O75943 681 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 CDC42EP5Q6NZY7 148 aa23.11■■□□□ 1.29
CCM2-202ENST00000381112 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 PSMD14O00487 310 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 WDHD1O75717 1129 aaPredicted RBP23.1■■□□□ 1.29
CCM2-202ENST00000381112 TMEM67Q5HYA8 995 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 LY9Q9HBG7 655 aa23.1■■□□□ 1.29
CCM2-202ENST00000381112 SAP30BPQ9UHR5 308 aaKnown RBP23.1■■□□□ 1.29
CCM2-202ENST00000381112 KLF18A0A0U1RQI7 1052 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
CCM2-202ENST00000381112 PRDM1O75626 825 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 LIFRP42702 1097 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 GMLQ99445 158 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 POLR3DP05423 398 aaPredicted RBP23.09■■□□□ 1.29
CCM2-202ENST00000381112 PLCD1P51178 756 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 PDE4BQ07343 736 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 SGMS1Q86VZ5 419 aa23.09■■□□□ 1.29
CCM2-202ENST00000381112 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
CCM2-202ENST00000381112 LAMB1P07942 1786 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 GJB2P29033 226 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 SART3Q15020 963 aaKnown RBP23.08■■□□□ 1.29
CCM2-202ENST00000381112 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 SENP2Q9HC62 589 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 NAP1L2Q9ULW6 460 aaPredicted RBP23.08■■□□□ 1.29
CCM2-202ENST00000381112 HPS5Q9UPZ3 1129 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 ZDHHC9Q9Y397 364 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
CCM2-202ENST00000381112 NFKBIBQ15653 356 aa23.07■■□□□ 1.28
CCM2-202ENST00000381112 LLPHQ9BRT6 129 aaKnown RBP23.07■■□□□ 1.28
CCM2-202ENST00000381112 DDX4Q9NQI0 724 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms