RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CGNQ9P2M7 1197 aaKnown RBP16.63■□□□□ 0.25
CLCN4-201ENST00000380829 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
CLCN4-201ENST00000380829 SMIM22K7EJ46 135 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 GRAPQ13588 217 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 NFXL1Q6ZNB6 911 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 UBR3Q6ZT12 1888 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 MICU3Q86XE3 530 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 CCDC144CPQ8IYA2 1237 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 TSPY26PQ9H489 355 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 ADD1P35611 737 aaKnown RBP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 METAP2P50579 478 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 APOA5Q6Q788 366 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 TMEM87BQ96K49 555 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
CLCN4-201ENST00000380829 ORC3Q9UBD5 711 aaPredicted RBP16.62■□□□□ 0.25
CLCN4-201ENST00000380829 MINDY4BA8MYZ0 360 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 CHD4Q14839 1912 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
CLCN4-201ENST00000380829 SEMA3EO15041 775 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 PRDX5P30044 214 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 PPARAQ07869 468 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 SLC27A3Q5K4L6 730 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 STAG1Q8WVM7 1258 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 CNNM2Q9H8M5 875 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 GJB4Q9NTQ9 266 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
CLCN4-201ENST00000380829 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 LIG1P18858 919 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 MECOMQ03112 1051 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 NSUN4Q96CB9 384 aaKnown RBP16.6■□□□□ 0.25
CLCN4-201ENST00000380829 KRT23Q9C075 422 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 TAOK2Q9UL54 1235 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 SERPINB2P05120 415 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 CDC27P30260 824 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 GIMAP6Q6P9H5 292 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
CLCN4-201ENST00000380829 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
CLCN4-201ENST00000380829 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
CLCN4-201ENST00000380829 IRS2Q9Y4H2 1338 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 CYP2D7A0A087X1C5 515 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 ZBTB43O43298 467 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 PGBD1Q96JS3 809 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 MYH13Q9UKX3 1938 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 ILDR2Q71H61 639 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 PROM2Q8N271 834 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
CLCN4-201ENST00000380829 ST5P78524 1137 aa16.58■□□□□ 0.25
CLCN4-201ENST00000380829 TXNRD1Q16881 649 aa16.58■□□□□ 0.25
CLCN4-201ENST00000380829 SGMS1Q86VZ5 419 aa16.58■□□□□ 0.25
CLCN4-201ENST00000380829 PHKBQ93100 1093 aa16.58■□□□□ 0.25
CLCN4-201ENST00000380829 AIFM3Q96NN9 605 aa16.58■□□□□ 0.25
CLCN4-201ENST00000380829 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.25
CLCN4-201ENST00000380829 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
CLCN4-201ENST00000380829 GOLGA8AA7E2F4 631 aa16.58■□□□□ 0.24
CLCN4-201ENST00000380829 ZNF771Q7L3S4 317 aaPredicted RBP16.58■□□□□ 0.24
CLCN4-201ENST00000380829 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
CLCN4-201ENST00000380829 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
CLCN4-201ENST00000380829 PDS5AQ29RF7 1337 aaKnown RBP16.57■□□□□ 0.24
CLCN4-201ENST00000380829 LIFRP42702 1097 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 DDR1Q08345 913 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 CAMK4Q16566 473 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 FBXO18Q8NFZ0 1043 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 BICD2Q8TD16 824 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
CLCN4-201ENST00000380829 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
CLCN4-201ENST00000380829 XDHP47989 1333 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
CLCN4-201ENST00000380829 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
CLCN4-201ENST00000380829 FAM217BQ9NTX9 383 aaPredicted RBP16.56■□□□□ 0.24
CLCN4-201ENST00000380829 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
CLCN4-201ENST00000380829 GPSM2P81274 684 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 EVX2Q03828 476 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 WTAPQ15007 396 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 SART3Q15020 963 aaKnown RBP16.56■□□□□ 0.24
CLCN4-201ENST00000380829 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 LEMD3Q9Y2U8 911 aa16.56■□□□□ 0.24
CLCN4-201ENST00000380829 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 RANBP6O60518 1105 aaKnown RBP16.55■□□□□ 0.24
CLCN4-201ENST00000380829 PRDM1O75626 825 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 DZIP1Q86YF9 867 aaKnown RBP16.55■□□□□ 0.24
CLCN4-201ENST00000380829 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 ANAPC4Q9UJX5 808 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 ERICH2A1L162 156 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 NR1I2O75469 434 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 CDKL5O76039 1030 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 ADCY5O95622 1261 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 MAPK8IP2Q13387 824 aaPredicted RBP16.55■□□□□ 0.24
CLCN4-201ENST00000380829 NTRK3Q16288 839 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 CTR9Q6PD62 1173 aa16.55■□□□□ 0.24
CLCN4-201ENST00000380829 CPLX2Q6PUV4 134 aaKnown RBP16.55■□□□□ 0.24
CLCN4-201ENST00000380829 ZNF396Q96N95 335 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms