RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TFCP2L1Q9NZI6 479 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 CYP26C1Q6V0L0 522 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 CCDC25Q86WR0 208 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 CSGALNACT2Q8N6G5 542 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 GPATCH11Q8N954 259 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 NAP1L3Q99457 506 aaPredicted RBP17.99■□□□□ 0.47
COL2A1-202ENST00000380518 ZNF75DP51815 510 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 SEL1L2Q5TEA6 688 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 CCDC63Q8NA47 563 aa17.99■□□□□ 0.47
COL2A1-202ENST00000380518 UBAP1LF5GYI3 381 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 TTC38Q5R3I4 469 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 SPATA24Q86W54 205 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 ZNF354CQ86Y25 554 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
COL2A1-202ENST00000380518 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 SMIM23A6NLE4 172 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 KIAA1524Q8TCG1 905 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 IMPACTQ9P2X3 320 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 SYNRGQ9UMZ2 1314 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 ZNF202O95125 648 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 GCKRQ14397 625 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 CERS3Q8IU89 383 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 TM6SF1Q9BZW5 370 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 TXNDC16Q9P2K2 825 aa17.98■□□□□ 0.47
COL2A1-202ENST00000380518 AKNAD1Q5T1N1 836 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 DPH6Q7L8W6 267 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 LPIN2Q92539 896 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 RBM17Q96I25 401 aaKnown RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 ZMYND15Q9H091 742 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 GPCPD1Q9NPB8 672 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 CETN3O15182 167 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 PPM1FP49593 454 aaPredicted RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 PAK1Q13153 545 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 CNBD1Q8NA66 436 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 INSRP06213 1382 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 GNPATO15228 680 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 NUP58Q9BVL2 599 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
COL2A1-202ENST00000380518 SAMD15Q9P1V8 674 aa17.97■□□□□ 0.47
COL2A1-202ENST00000380518 PRDM1O75626 825 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 TRAPPC3LQ5T215 181 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 NLRP12P59046 1061 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 KRT40Q6A162 431 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 SLC52A2Q9HAB3 445 aa17.96■□□□□ 0.47
COL2A1-202ENST00000380518 ARL1P40616 181 aaPredicted RBP17.96■□□□□ 0.46
COL2A1-202ENST00000380518 KIFAP3Q92845 792 aa17.96■□□□□ 0.46
COL2A1-202ENST00000380518 KCNK9Q9NPC2 374 aa17.96■□□□□ 0.46
COL2A1-202ENST00000380518 NFE2L3Q9Y4A8 694 aa17.96■□□□□ 0.46
COL2A1-202ENST00000380518 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 UFL1O94874 794 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 TNFAIP3P21580 790 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 WDR66Q8TBY9 1149 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 FNBP1Q96RU3 617 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
COL2A1-202ENST00000380518 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 CCDC114Q96M63 670 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 TXKP42681 527 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 BIRC3Q13489 604 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 C8orf74Q6P047 294 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 UBLCP1Q8WVY7 318 aaPredicted RBP17.95■□□□□ 0.46
COL2A1-202ENST00000380518 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 MAPK8IP1Q9UQF2 711 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 SPOPO43791 374 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 CCNT1O60563 726 aaKnown RBP17.95■□□□□ 0.46
COL2A1-202ENST00000380518 U2AF2P26368 475 aaKnown RBP eCLIP17.95■□□□□ 0.461e-5■□□□□ 9.3
COL2A1-202ENST00000380518 NONOQ15233 471 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL2A1-202ENST00000380518 RBM26Q5T8P6 1007 aaKnown RBP17.95■□□□□ 0.46
COL2A1-202ENST00000380518 KRT25Q7Z3Z0 450 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 BTG4Q9NY30 223 aa17.95■□□□□ 0.46
COL2A1-202ENST00000380518 KIF24Q5T7B8 1368 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 SETDB1Q15047 1291 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 PZPP20742 1482 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 SMTNP53814 917 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 SP4Q02446 784 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 GTF3C6Q969F1 213 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 KAT6BQ8WYB5 2073 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 LMBRD1Q9NUN5 540 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 A1BGP04217 495 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 INF2Q27J81 1249 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 CDC37L1Q7L3B6 337 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 GPR161Q8N6U8 529 aaKnown RBP17.94■□□□□ 0.46
COL2A1-202ENST00000380518 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
COL2A1-202ENST00000380518 DSCC1Q9BVC3 393 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 NKIRAS1Q9NYS0 192 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 LRWD1Q9UFC0 647 aa17.93■□□□□ 0.46
COL2A1-202ENST00000380518 ACTN4O43707 911 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms