RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 PKNOX2Q96KN3 472 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 MYL10Q9BUA6 226 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 FAM217BQ9NTX9 383 aaPredicted RBP18.82■□□□□ 0.6
VPS16-203ENST00000380469 MYO5AQ9Y4I1 1855 aaKnown RBP18.82■□□□□ 0.6
VPS16-203ENST00000380469 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 PSDA5PKW4 1024 aaPredicted RBP18.82■□□□□ 0.6
VPS16-203ENST00000380469 KCNJ6P48051 423 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 CTDSPL2Q05D32 466 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 SAFBQ15424 915 aaKnown RBP eCLIP18.82■□□□□ 0.6
VPS16-203ENST00000380469 MFSD6Q6ZSS7 791 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 AK7Q96M32 723 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 INCENPQ9NQS7 918 aa18.82■□□□□ 0.6
VPS16-203ENST00000380469 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
VPS16-203ENST00000380469 FMNL1O95466 1100 aaPredicted RBP18.81■□□□□ 0.6
VPS16-203ENST00000380469 MYL5Q02045 173 aa18.81■□□□□ 0.6
VPS16-203ENST00000380469 PNOCQ13519 176 aa18.81■□□□□ 0.6
VPS16-203ENST00000380469 NAA30Q147X3 362 aaPredicted RBP18.81■□□□□ 0.6
VPS16-203ENST00000380469 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
VPS16-203ENST00000380469 CLIC6Q96NY7 704 aa18.81■□□□□ 0.6
VPS16-203ENST00000380469 SERPINC1P01008 464 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 AKNAD1Q5T1N1 836 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 CNNM3Q8NE01 707 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 NACAP1Q9BZK3 213 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 KCNH3Q9ULD8 1083 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 LRP6O75581 1613 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 ITGB4P16144 1822 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 MYO1BO43795 1136 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 TUBB4AP04350 444 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 UBASH3AP57075 661 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 SART3Q15020 963 aaKnown RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 KRBA2Q6ZNG9 492 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 KRI1Q8N9T8 703 aaKnown RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 ERO1AQ96HE7 468 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 PPP1R13BQ96KQ4 1090 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 MPHOSPH8Q99549 860 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 ARMT1Q9H993 441 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
VPS16-203ENST00000380469 ZNF215Q9UL58 517 aaPredicted RBP18.8■□□□□ 0.6
VPS16-203ENST00000380469 CCP110O43303 1012 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 IFNAR1P17181 557 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 GNAT2P19087 354 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 NOSTRINQ8IVI9 506 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 TRIM22Q8IYM9 498 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 ZNF34Q8IZ26 560 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 BTG4Q9NY30 223 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 BCL9O00512 1426 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 RASGRF1Q13972 1273 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 LONRF3Q496Y0 759 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
VPS16-203ENST00000380469 TOMM22Q9NS69 142 aa18.79■□□□□ 0.6
VPS16-203ENST00000380469 NUP98P52948 1817 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 SLU7O95391 586 aaKnown RBP18.78■□□□□ 0.6
VPS16-203ENST00000380469 TDO2P48775 406 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 HSD3B7Q9H2F3 369 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 ERICH2A1L162 156 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 GSG1L2A8MUP6 293 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
VPS16-203ENST00000380469 DMTNQ08495 405 aa18.78■□□□□ 0.6
VPS16-203ENST00000380469 RRP12Q5JTH9 1297 aaKnown RBP18.78■□□□□ 0.6
VPS16-203ENST00000380469 METTL16Q86W50 562 aaKnown RBP18.78■□□□□ 0.6
VPS16-203ENST00000380469 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
VPS16-203ENST00000380469 MMP1P03956 469 aa18.77■□□□□ 0.6
VPS16-203ENST00000380469 WTAPQ15007 396 aa18.77■□□□□ 0.6
VPS16-203ENST00000380469 RTN1Q16799 776 aa18.77■□□□□ 0.6
VPS16-203ENST00000380469 CFAP100Q494V2 611 aa18.77■□□□□ 0.6
VPS16-203ENST00000380469 UTP14CQ5TAP6 766 aaKnown RBP18.77■□□□□ 0.6
VPS16-203ENST00000380469 ELOA2Q8IYF1 753 aaPredicted RBP18.77■□□□□ 0.6
VPS16-203ENST00000380469 SLC4A4Q9Y6R1 1079 aa18.77■□□□□ 0.6
VPS16-203ENST00000380469 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.77■□□□□ 0.59
VPS16-203ENST00000380469 TMTC2Q8N394 836 aa18.77■□□□□ 0.59
VPS16-203ENST00000380469 STAG1Q8WVM7 1258 aa18.77■□□□□ 0.59
VPS16-203ENST00000380469 ECM29Q5VYK3 1845 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 CCDC196A0A1B0GTZ2 297 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 BTBD18B2RXH4 712 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 DIS3L2Q8IYB7 885 aaKnown RBP18.76■□□□□ 0.59
VPS16-203ENST00000380469 ZNF397Q8NF99 534 aaPredicted RBP18.76■□□□□ 0.59
VPS16-203ENST00000380469 GTPBP4Q9BZE4 634 aaKnown RBP18.76■□□□□ 0.59
VPS16-203ENST00000380469 PCDHA5Q9Y5H7 936 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 NID2Q14112 1375 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 KAT6BQ8WYB5 2073 aa18.76■□□□□ 0.59
VPS16-203ENST00000380469 UBE2Q2LH0YL09 131 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 FOXP1Q9H334 677 aaPredicted RBP18.75■□□□□ 0.59
VPS16-203ENST00000380469 PRDM4Q9UKN5 801 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 ARAP2Q8WZ64 1704 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 PRKAB2O43741 272 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 SYT10Q6XYQ8 523 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 HOMER1Q86YM7 354 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 MTA3Q9BTC8 594 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 RNF41Q9H4P4 317 aaPredicted RBP18.75■□□□□ 0.59
VPS16-203ENST00000380469 TACC3Q9Y6A5 838 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 CHD4Q14839 1912 aa18.75■□□□□ 0.59
VPS16-203ENST00000380469 EXOC5O00471 708 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 DEXIO95424 95 aa18.74■□□□□ 0.59
VPS16-203ENST00000380469 TOP1P11387 765 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms