RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 WTAPQ15007 396 aa11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 DTNBP1Q96EV8 351 aa11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 DBF4Q9UBU7 674 aaPredicted RBP11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 ATP6V0A2Q9Y487 856 aa11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 TRIM31Q9BZY9 425 aa11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
CCDC85C-201ENST00000380243 CCDC151A5D8V7 595 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 MGEA5O60502 916 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 MAK16Q9BXY0 300 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 PDS5BQ9NTI5 1447 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 ANKRD20A3Q5VUR7 823 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 IRX4P78413 519 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 OTUD7AQ8TE49 926 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 SKIP12755 728 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 STX2P32856 288 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 RNF8O76064 485 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 PRR16Q569H4 304 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 CDC37L1Q7L3B6 337 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 CPA1P15085 419 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 CCDC85AQ96PX6 553 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 NSD2O96028 1365 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 MEIS3Q99687 375 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 SLC5A1P13866 664 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 CALML3P27482 149 aa11.66□□□□□ -0.54
CCDC85C-201ENST00000380243 MYO1AQ9UBC5 1043 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 SMC1BQ8NDV3 1235 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 CACTINQ8WUQ7 758 aaKnown RBP11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 NOP53Q9NZM5 478 aaKnown RBP11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 TMED1Q13445 227 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 TAF11Q15544 211 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 P3H4Q92791 437 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 POSTNQ15063 836 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 BICC1Q9H694 974 aaKnown RBP11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 TAB2Q9NYJ8 693 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 RANBP1P43487 201 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 CCDC141Q6ZP82 1450 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 OR8K1Q8NGG5 319 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 MAP3K7O43318 606 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 MCM7P33993 719 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 GNPTABQ3T906 1256 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 ARHGAP42A6NI28 874 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 PKP1Q13835 747 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 CSRNP2Q9H175 543 aa11.65□□□□□ -0.54
CCDC85C-201ENST00000380243 PIK3R4Q99570 1358 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 STMN1P16949 149 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 NNTQ13423 1086 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 FAM169AQ9Y6X4 670 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 CCDC169A6NNP5 214 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 TRIM58Q8NG06 486 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 XAB2Q9HCS7 855 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 NELFBQ8WX92 580 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 PAK1Q13153 545 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 RALGAPBQ86X10 1494 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 ANKRD42Q8N9B4 389 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 ABCF2Q9UG63 623 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 NR1I2O75469 434 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 KRT2P35908 639 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 KLHDC4Q8TBB5 520 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 WHAMMQ8TF30 809 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 PSMB7Q99436 277 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 MYD88Q99836 296 aa11.64□□□□□ -0.55
CCDC85C-201ENST00000380243 CYP2C19P33261 490 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 PLCD1P51178 756 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 DISP3Q9P2K9 1392 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 KRIT1O00522 736 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 TROVE2P10155 538 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 USP37Q86T82 979 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 SFMBT2Q5VUG0 894 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 PPP4R3AQ6IN85 833 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 RAB17Q9H0T7 212 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 SATB1Q01826 763 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 SLC9C1Q4G0N8 1177 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 KCTD16Q68DU8 428 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 ASIC2Q16515 512 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 CCT6BQ92526 530 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 PARP2Q9UGN5 583 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 PEX26Q7Z412 305 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 CFAP61Q8NHU2 1237 aa11.63□□□□□ -0.55
CCDC85C-201ENST00000380243 ZBTB22O15209 634 aa11.62□□□□□ -0.55
CCDC85C-201ENST00000380243 SPOPO43791 374 aa11.62□□□□□ -0.55
CCDC85C-201ENST00000380243 PSMD6Q15008 389 aa11.62□□□□□ -0.55
CCDC85C-201ENST00000380243 STX10O60499 249 aa11.62□□□□□ -0.55
CCDC85C-201ENST00000380243 UAP1Q16222 522 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms