RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 COL18A1P39060 1754 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 A0A0U1RQJ8 604 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 VWA3AA6NCI4 1184 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 IKBKBO14920 756 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 POLR2DO15514 142 aaKnown RBP10.04□□□□□ -0.8
TRIM6-203ENST00000380107 NRDCO43847 1150 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 COBLO75128 1261 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 PNMA6AP0CW24 399 aaPredicted RBP10.04□□□□□ -0.8
TRIM6-203ENST00000380107 NR5A1Q13285 461 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 MTF1Q14872 753 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 KARSQ15046 597 aaKnown RBP10.04□□□□□ -0.8
TRIM6-203ENST00000380107 NTRK3Q16288 839 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 RESP18Q5W5W9 173 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 KRBA2Q6ZNG9 492 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 VSTM4Q8IW00 320 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 ATRIPQ8WXE1 791 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 UBXN4Q92575 508 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRIM6-203ENST00000380107 IRX2Q9BZI1 471 aaPredicted RBP10.04□□□□□ -0.8
TRIM6-203ENST00000380107 ZSWIM5Q9P217 1185 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 ASAP1Q9ULH1 1129 aa10.04□□□□□ -0.8
TRIM6-203ENST00000380107 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 hCG_1642624A0A1W2PR95 340 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 SMIM22K7EJ46 135 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PRKAB2O43741 272 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 CCDC102BQ68D86 513 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 FAM53CQ9NYF3 392 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 RIC1Q4ADV7 1423 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 ZNF142P52746 1687 aaPredicted RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 ECM29Q5VYK3 1845 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 IFIT3O14879 490 aaKnown RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 CDK11BP21127 795 aaKnown RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 TOB1P50616 345 aaPredicted RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 GNG11P61952 73 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 TRIM29Q14134 588 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 TMEM139Q8IV31 216 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 ARMT1Q9H993 441 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 SAMSN1Q9NSI8 373 aaKnown RBP10.03□□□□□ -0.8
TRIM6-203ENST00000380107 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 SERTAD1Q9UHV2 236 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PPP2R2CQ9Y2T4 447 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 RIPOR2Q9Y4F9 1068 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PARP3Q9Y6F1 533 aa10.03□□□□□ -0.8
TRIM6-203ENST00000380107 PDE6AP16499 860 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 CPLX3Q8WVH0 158 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 AIDAQ96BJ3 306 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 CHMP4CQ96CF2 233 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 CCDC34Q96HJ3 373 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 EPB41L4AQ9HCS5 686 aaPredicted RBP10.02□□□□□ -0.81
TRIM6-203ENST00000380107 MAN1B1Q9UKM7 699 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 NFE2L3Q9Y4A8 694 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 PCDHB6Q9Y5E3 794 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 FAM205CA6NFA0 338 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 PPP6R2O75170 966 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 STX17P56962 302 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 BMS1Q14692 1282 aaKnown RBP10.02□□□□□ -0.81
TRIM6-203ENST00000380107 TEX35Q5T0J7 233 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 KLHL10Q6JEL2 608 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 MAGEB6Q8N7X4 407 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 MED15Q96RN5 788 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 NOL10Q9BSC4 688 aaKnown RBP10.02□□□□□ -0.81
TRIM6-203ENST00000380107 SLC12A7Q9Y666 1083 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 PCDH11XQ9BZA7 1347 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 PCDH11YQ9BZA8 1340 aa10.02□□□□□ -0.81
TRIM6-203ENST00000380107 TADA3O75528 432 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 MBD4O95243 580 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 TFRCP02786 760 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 CPLX2Q6PUV4 134 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 DIS3L2Q8IYB7 885 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 NUP133Q8WUM0 1156 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 TIGD1Q96MW7 591 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 BAG1Q99933 345 aaPredicted RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 SPEF2Q9C093 1822 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 KCPQ6ZWJ8 1503 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 DDX60Q8IY21 1712 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 CBFA2T2O43439 604 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 SASH3O75995 380 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 PCCAP05165 728 aaPredicted RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 GYS2P54840 703 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 SSRP1Q08945 709 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 KIF6Q6ZMV9 814 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 NOSTRINQ8IVI9 506 aa10.01□□□□□ -0.81
TRIM6-203ENST00000380107 SMYD4Q8IYR2 804 aaPredicted RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
TRIM6-203ENST00000380107 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms